RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 SUPT20HL1Q3ZLR7 823 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 SAMD3Q8N6K7 520 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 GPATCH11Q8N954 259 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 ZKSCAN4Q969J2 545 aaPredicted RBP5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 TEKT1Q969V4 418 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 ZNF333Q96JL9 665 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 WRNIP1Q96S55 665 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 FEZ1Q99689 392 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 CCDC113Q9H0I3 377 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 ZNF358Q9NW07 568 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 TMEM260Q9NX78 707 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 PTPN22Q9Y2R2 807 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 PTCH2Q9Y6C5 1203 aa5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.91□□□□□ -1.46
GAPLINC-202ENST00000579007 CDH23Q9H251 3354 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 PRUNE2Q8WUY3 3088 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 FAM221BA6H8Z2 402 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 BTBD19C9JJ37 291 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 EYA2O00167 538 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 SLURP2P0DP57 97 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 ADORA1P30542 326 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 ETFBP38117 255 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 PHKA1P46020 1223 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 INHBEP58166 350 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 SP3Q02447 781 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 COL9A2Q14055 689 aaPredicted RBP5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 FAM83AQ86UY5 434 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 TRMT2AQ8IZ69 625 aaKnown RBP5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 STAG2Q8N3U4 1231 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 TBC1D22AQ8WUA7 517 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 SHISA4Q96DD7 197 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 ERO1AQ96HE7 468 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 MEIS3Q99687 375 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 SIL1Q9H173 461 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 SMC4Q9NTJ3 1288 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 EVA1BQ9NVM1 165 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 CNTN3Q9P232 1028 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 PA2G4Q9UQ80 394 aaKnown RBP5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 TNNQ9UQP3 1299 aa5.9□□□□□ -1.46
GAPLINC-202ENST00000579007 MAST3O60307 1309 aa5.9□□□□□ -1.47
GAPLINC-202ENST00000579007 COL2A1P02458 1487 aaPredicted RBP5.9□□□□□ -1.47
GAPLINC-202ENST00000579007 RLFQ13129 1914 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 BAZ2AQ9UIF9 1905 aaKnown RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 BACH1O14867 736 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 CCNYL3P0C7X3 344 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 SLC5A1P13866 664 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 EN2P19622 333 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 NASPP49321 788 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 FOXD4Q12950 439 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 PPIL2Q13356 520 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 PROX2Q3B8N5 592 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 ALDH1L2Q3SY69 923 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 CAVIN4Q5BKX8 364 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 COX20Q5RI15 118 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 FKBP1CQ5VVH2 108 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 CDC42EP5Q6NZY7 148 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 SH3BP5LQ7L8J4 393 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 ZNF384Q8TF68 577 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 LPIN2Q92539 896 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 IL17RAQ96F46 866 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 SPON2Q9BUD6 331 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 EFCC1Q9HA90 598 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 KIAA1468Q9P260 1216 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 POLIQ9UNA4 740 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 CSADQ9Y600 493 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 LRRFIP2Q9Y608 721 aaKnown RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 COL11A1P12107 1806 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 GAKO14976 1311 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 SALL1Q9NSC2 1324 aa5.89□□□□□ -1.47
GAPLINC-202ENST00000579007 LTBP2Q14767 1821 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 EIF1AYO14602 144 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ACTN4O43707 911 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 TLR2O60603 784 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 FRAT2O75474 233 aaPredicted RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 CIAO1O76071 339 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 IFIT1P09914 478 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 GTF2A2P52657 109 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 LACTBP83111 547 aaPredicted RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 TCP10Q12799 353 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 RASGRF1Q13972 1273 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 DHX8Q14562 1220 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ZRSR2Q15696 482 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 NOL9Q5SY16 702 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 HHIPL2Q6UWX4 724 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 PI16Q6UXB8 463 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 RNF19BQ6ZMZ0 732 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 KRBA2Q6ZNG9 492 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 MIGA2Q7L4E1 593 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ERO1BQ86YB8 467 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 LILRB2Q8N423 598 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms