RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 RANBP17Q9H2T7 1088 aaKnown RBP12.53□□□□□ -0.4
ABR-235ENST00000576964 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
ABR-235ENST00000576964 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
ABR-235ENST00000576964 HOMER2Q9NSB8 354 aa12.53□□□□□ -0.4
ABR-235ENST00000576964 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
ABR-235ENST00000576964 PTPREP23469 700 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 CTGFP29279 349 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 SNAP25P60880 206 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 IRF5Q13568 498 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
ABR-235ENST00000576964 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 BRF1Q92994 677 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 MYL10Q9BUA6 226 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
ABR-235ENST00000576964 ACAD9Q9H845 621 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
ABR-235ENST00000576964 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
ABR-235ENST00000576964 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
ABR-235ENST00000576964 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
ABR-235ENST00000576964 A0A0G2JMZ2 1700 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 PALM3A6NDB9 673 aaPredicted RBP12.51□□□□□ -0.41
ABR-235ENST00000576964 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 ADCY3O60266 1144 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 SEC24BO95487 1268 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 CYP2B6P20813 491 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 ADORA2AP29274 412 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABR-235ENST00000576964 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 GRB14Q14449 540 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 ANKRD1Q15327 319 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
ABR-235ENST00000576964 RTN1Q16799 776 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 HOMER1Q86YM7 354 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 FANCBQ8NB91 859 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 TRERF1Q96PN7 1200 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 APBA2Q99767 749 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 RNF146Q9NTX7 359 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 PDRG1Q9NUG6 133 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
ABR-235ENST00000576964 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
ABR-235ENST00000576964 RXRAP19793 462 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 GRK4P32298 578 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 RCAN1P53805 252 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 UBXN2AP68543 259 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 USH1GQ495M9 461 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
ABR-235ENST00000576964 C22orf23Q9BZE7 217 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
ABR-235ENST00000576964 RLFQ13129 1914 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 PFASO15067 1338 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 ZNF536O15090 1300 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 ABCB11O95342 1321 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 ZBTB5O15062 677 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 CAP1Q01518 475 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
ABR-235ENST00000576964 QRICH1Q2TAL8 776 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 MORN1Q5T089 497 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 GJD2Q9UKL4 321 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
ABR-235ENST00000576964 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 HMGCRP04035 888 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 SMARCA1P28370 1054 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 CPLX2Q6PUV4 134 aaKnown RBP12.48□□□□□ -0.41
ABR-235ENST00000576964 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 SH3TC2Q8TF17 1288 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 PIBF1Q8WXW3 757 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
ABR-235ENST00000576964 MGAMO43451 1857 aa12.48□□□□□ -0.41
ABR-235ENST00000576964 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
ABR-235ENST00000576964 COL11A1P12107 1806 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms