RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 DEFB128Q7Z7B8 93 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 HERC6Q8IVU3 1022 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 AMOTL1Q8IY63 956 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 GDPD5Q8WTR4 605 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 CCDC17Q96LX7 622 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 MFSD14AQ96MC6 490 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 DBNDD2Q9BQY9 259 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 AP5M1Q9H0R1 490 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 FBXO40Q9UH90 709 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 FAM50BQ9Y247 325 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 NCOR1O75376 2440 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 MUC6Q6W4X9 2439 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 GNAI2P04899 355 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 AKR1B1P15121 316 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 PTPN5P54829 565 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 PTCRAQ6ISU1 281 aaPredicted RBP7.11□□□□□ -1.27
SMG6-219ENST00000575663 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 CCDC144CPQ8IYA2 1237 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 REPS2Q8NFH8 660 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 AGBL1Q96MI9 1066 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 PRRX2Q99811 253 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 SLF1Q9BQI6 1058 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 ZBED2Q9BTP6 218 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 FTOQ9C0B1 505 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMG6-219ENST00000575663 TRPV6Q9H1D0 765 aa7.11□□□□□ -1.27
SMG6-219ENST00000575663 ALDH8A1Q9H2A2 487 aaPredicted RBP7.11□□□□□ -1.27
SMG6-219ENST00000575663 NOB1Q9ULX3 412 aaKnown RBP7.11□□□□□ -1.27
SMG6-219ENST00000575663 REV3LO60673 3130 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 TNKSO95271 1327 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 ZNF316A6NFI3 1004 aaPredicted RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 PITPNM1O00562 1244 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 CTAGE5O15320 804 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 LPXNO60711 386 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 ZBED4O75132 1171 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 ARHGEF15O94989 841 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 EEF2P13639 858 aaKnown RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 IL9P15248 144 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 SLC4A3P48751 1232 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMG6-219ENST00000575663 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 CHST13Q8NET6 341 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 RIOK1Q9BRS2 568 aaKnown RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 UPF3BQ9BZI7 483 aaKnown RBP7.1□□□□□ -1.27
SMG6-219ENST00000575663 KANSL2Q9H9L4 492 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 PRKAG3Q9UGI9 489 aa7.1□□□□□ -1.27
SMG6-219ENST00000575663 CDK5RAP2Q96SN8 1893 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 GRIN2DO15399 1336 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 PNMA6EA0A0J9YXQ4 647 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 GRXCR2A6NFK2 248 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 ASB14A6NK59 587 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 ATP2A1O14983 1001 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 CT47B1P0C2W7 299 aaPredicted RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 CYP2C9P11712 490 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 OAZ1P54368 228 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 PSMC6P62333 389 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 BFSP2Q13515 415 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 TTF1Q15361 905 aaPredicted RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 HFE2Q6ZVN8 426 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 CPXCR1Q8N123 301 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 CCDC155Q8N6L0 562 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 PRPF38AQ8NAV1 312 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 SDR42E1Q8WUS8 393 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 DDRGK1Q96HY6 314 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 TGS1Q96RS0 853 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 POP1Q99575 1024 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 KATNBL1Q9H079 304 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 DCP1AQ9NPI6 582 aaPredicted RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 GPHNQ9NQX3 736 aaPredicted RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 TRMT13Q9NUP7 481 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 POLR3EQ9NVU0 708 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 CTNNA3Q9UI47 895 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 DBNLQ9UJU6 430 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 GNEQ9Y223 722 aaKnown RBP7.09□□□□□ -1.27
SMG6-219ENST00000575663 NOD1Q9Y239 953 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 COG6Q9Y2V7 657 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 Q9Y3F1 56 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 MYH1P12882 1939 aa7.09□□□□□ -1.27
SMG6-219ENST00000575663 NAV1Q8NEY1 1877 aa7.09□□□□□ -1.28
SMG6-219ENST00000575663 GBF1Q92538 1859 aa7.09□□□□□ -1.28
SMG6-219ENST00000575663 ASTN1O14525 1302 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 RAD50Q92878 1312 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 POTEB3A0JP26 581 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 CYP2D6P10635 497 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 CPT1AP50416 773 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 PKN1Q16512 942 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 PTPROQ16827 1216 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 TIGD5Q53EQ6 642 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 FAM47CQ5HY64 1035 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 POTEBQ6S5H4 581 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms