RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 PLA2G6O60733 806 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CNMDO75829 334 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 FLOT1O75955 427 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CTDNEP1O95476 244 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CTGFP29279 349 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 DSG3P32926 999 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SLC16A2P36021 539 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 HMGN5P82970 282 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 AKAP17AQ02040 695 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 COG2Q14746 738 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 TTBK2Q6IQ55 1244 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 BTNL9Q6UXG8 535 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 NBPF11Q86T75 865 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CMTR1Q8N1G2 835 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SRBD1Q8N5C6 995 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 PHKBQ93100 1093 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 ATG4CQ96DT6 458 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 RRP36Q96EU6 259 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SLF1Q9BQI6 1058 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 PAGR1Q9BTK6 254 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SPZ1Q9BXG8 430 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SLC26A6Q9BXS9 759 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 RNF26Q9BY78 433 aaPredicted RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 ARHGAP39Q9C0H5 1083 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 UBA5Q9GZZ9 404 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CPVLQ9H3G5 476 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 TXNRD2Q9NNW7 524 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 BTBD7Q9P203 1132 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
PRPF8-210ENST00000574217 RBPJLQ9UBG7 517 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SMC3Q9UQE7 1217 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 KIF3AQ9Y496 699 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 CNTNAP5Q8WYK1 1306 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 STK36Q9NRP7 1315 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 DOCK3Q8IZD9 2030 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 CYTH3O43739 400 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 JAK2O60674 1132 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PPFIA3O75145 1194 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 LACTBP83111 547 aaPredicted RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 FUT2Q10981 343 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 FAM110CQ1W6H9 321 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 Q3C1V9 767 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 IFFO2Q5TF58 517 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 LBX2Q6XYB7 198 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 HOMER1Q86YM7 354 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 ADGRF4Q8IZF3 695 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PRPF38AQ8NAV1 312 aaKnown RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 FAM184AQ8NB25 1140 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 SPRYD3Q8NCJ5 442 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 SMARCC2Q8TAQ2 1214 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 GTF3C2Q8WUA4 911 aaPredicted RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PIBF1Q8WXW3 757 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 KIFC2Q96AC6 838 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 DDX11Q96FC9 970 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 ERO1AQ96HE7 468 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 IPO9Q96P70 1041 aaKnown RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 RIOX1Q9H6W3 641 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 JMJD4Q9H9V9 463 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 VAT1LQ9HCJ6 419 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 HOXC10Q9NYD6 342 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 ORC3Q9UBD5 711 aaPredicted RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 MORF4L1Q9UBU8 362 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 SEC63Q9UGP8 760 aaKnown RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PPP1R9AQ9ULJ8 1098 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 RABGAP1Q9Y3P9 1069 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 V9GY48 417 aaPredicted RBP7.75□□□□□ -1.17
PRPF8-210ENST00000574217 MYPNQ86TC9 1320 aa7.75□□□□□ -1.17
PRPF8-210ENST00000574217 PLXNB2O15031 1838 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 ZBTB5O15062 677 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 PRPF3O43395 683 aaKnown RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 DTNBO60941 627 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 DEXIO95424 95 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 FDX1P10109 184 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 GJB2P29033 226 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 PSMC4P43686 418 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 ERVK-9P63128 1117 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 ERVK-24P63145 666 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 KIF22Q14807 665 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 CDC37Q16543 378 aaPredicted RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 SLC35G1Q2M3R5 365 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 CTU1Q7Z7A3 348 aaKnown RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 REPS2Q8NFH8 660 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 GPRC5AQ8NFJ5 357 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 WASF1Q92558 559 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 PIGSQ96S52 555 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 ADAMTS5Q9UNA0 930 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 TRIM17Q9Y577 477 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 CTDP1Q9Y5B0 961 aaPredicted RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 MYH6P13533 1939 aa7.74□□□□□ -1.17
PRPF8-210ENST00000574217 ZNFX1Q9P2E3 1918 aaKnown RBP7.74□□□□□ -1.17
PRPF8-210ENST00000574217 SMCHD1A6NHR9 2005 aa7.73□□□□□ -1.17
PRPF8-210ENST00000574217 PNMA6FA0A0J9YX94 578 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms