RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 HTATIP2Q9BUP3 242 aa16.84■□□□□ 0.29
ABR-223ENST00000573895 RIPK3Q9Y572 518 aa16.84■□□□□ 0.29
ABR-223ENST00000573895 SMCHD1A6NHR9 2005 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 KDM4AO75164 1064 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 PDHBP11177 359 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 CYBAP13498 195 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 CCND3P30281 292 aaPredicted RBP16.83■□□□□ 0.28
ABR-223ENST00000573895 CYP2C19P33261 490 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
ABR-223ENST00000573895 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 NECAB2Q7Z6G3 386 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 RAVER2Q9HCJ3 691 aaKnown RBP16.83■□□□□ 0.28
ABR-223ENST00000573895 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 PRR12Q9ULL5 1215 aa16.83■□□□□ 0.28
ABR-223ENST00000573895 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 ZNF536O15090 1300 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 DNAJC25-GNG10A0A024R161 153 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 B4E1Z4 1266 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 SLC27A2O14975 620 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 KRT32Q14532 448 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 ZSCAN10Q96SZ4 725 aaPredicted RBP16.82■□□□□ 0.28
ABR-223ENST00000573895 TINF2Q9BSI4 451 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 PNMA2Q9UL42 364 aa16.82■□□□□ 0.28
ABR-223ENST00000573895 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
ABR-223ENST00000573895 CYP21A2P08686 494 aa16.81■□□□□ 0.28
ABR-223ENST00000573895 MNX1P50219 401 aaPredicted RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
ABR-223ENST00000573895 TRDNQ13061 729 aa16.81■□□□□ 0.28
ABR-223ENST00000573895 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
ABR-223ENST00000573895 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
ABR-223ENST00000573895 PAWRQ96IZ0 340 aaKnown RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
ABR-223ENST00000573895 SEPT4O43236 478 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 PGK2P07205 417 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 SYDE2Q5VT97 1194 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 ANKRD35Q8N283 1001 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 ZKSCAN3Q9BRR0 538 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 ACAD9Q9H845 621 aa16.8■□□□□ 0.28
ABR-223ENST00000573895 TNKSO95271 1327 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 ALPK3Q96L96 1907 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 ICAM1P05362 532 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 PSMA5P28066 241 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 ENAHQ8N8S7 591 aaPredicted RBP16.79■□□□□ 0.28
ABR-223ENST00000573895 PNMA1Q8ND90 353 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 KAT14Q9H8E8 782 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
ABR-223ENST00000573895 MCM3APO60318 1980 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 PFASO15067 1338 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 CNGA1P29973 690 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 DPF3Q92784 378 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 TRERF1Q96PN7 1200 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 RNF146Q9NTX7 359 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
ABR-223ENST00000573895 MYH6P13533 1939 aa16.78■□□□□ 0.28
ABR-223ENST00000573895 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.28
ABR-223ENST00000573895 HMGB1P09429 215 aaKnown RBP16.77■□□□□ 0.28
ABR-223ENST00000573895 COL6A1P12109 1028 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 SLC16A2P36021 539 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 RABEP1Q15276 862 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 SEC23AQ15436 765 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 NCOA7Q8NI08 942 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 DIS3LQ8TF46 1054 aaKnown RBP16.77■□□□□ 0.28
ABR-223ENST00000573895 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 KIF2CQ99661 725 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 C11orf49Q9H6J7 331 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 GPCPD1Q9NPB8 672 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 NR2E3Q9Y5X4 410 aa16.77■□□□□ 0.28
ABR-223ENST00000573895 WDR19Q8NEZ3 1342 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 E7EWF7 191 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 ALAS1P13196 640 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 ASPRV1Q53RT3 343 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 IFIT1BQ5T764 474 aaKnown RBP16.76■□□□□ 0.27
ABR-223ENST00000573895 CCDC174Q6PII3 467 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 ARRDC4Q8NCT1 418 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 MAF1Q9H063 256 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 A1CFQ9NQ94 594 aaKnown RBP16.76■□□□□ 0.27
ABR-223ENST00000573895 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
ABR-223ENST00000573895 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
ABR-223ENST00000573895 DNM1LO00429 736 aa16.75■□□□□ 0.27
ABR-223ENST00000573895 ZNF865P0CJ78 1059 aaPredicted RBP16.75■□□□□ 0.27
ABR-223ENST00000573895 PRAMEF19Q5SWL8 479 aa16.75■□□□□ 0.27
ABR-223ENST00000573895 CYB5R4Q7L1T6 521 aa16.75■□□□□ 0.27
ABR-223ENST00000573895 RALYLQ86SE5 291 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms