RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 ERICH2A1L162 156 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 COBLO75128 1261 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
ABR-208ENST00000570688 FLT3LGP49771 235 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 PLS1Q14651 629 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
ABR-208ENST00000570688 CCL14Q16627 93 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
ABR-208ENST00000570688 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 CLEC4DQ8WXI8 215 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 PIGSQ96S52 555 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 FLRT1Q9NZU1 646 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 ASTN1O14525 1302 aa13.01□□□□□ -0.33
ABR-208ENST00000570688 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
ABR-208ENST00000570688 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
ABR-208ENST00000570688 CCDC69A6NI79 296 aa13□□□□□ -0.33
ABR-208ENST00000570688 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
ABR-208ENST00000570688 PTPREP23469 700 aa13□□□□□ -0.33
ABR-208ENST00000570688 PSMA5P28066 241 aa13□□□□□ -0.33
ABR-208ENST00000570688 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 AK2P54819 239 aa13□□□□□ -0.33
ABR-208ENST00000570688 FCGRTP55899 365 aa13□□□□□ -0.33
ABR-208ENST00000570688 TRIM32Q13049 653 aa13□□□□□ -0.33
ABR-208ENST00000570688 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
ABR-208ENST00000570688 GRB14Q14449 540 aa13□□□□□ -0.33
ABR-208ENST00000570688 NTRK3Q16288 839 aa13□□□□□ -0.33
ABR-208ENST00000570688 CDC37Q16543 378 aaPredicted RBP13□□□□□ -0.33
ABR-208ENST00000570688 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
ABR-208ENST00000570688 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
ABR-208ENST00000570688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
ABR-208ENST00000570688 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
ABR-208ENST00000570688 FANCBQ8NB91 859 aa13□□□□□ -0.33
ABR-208ENST00000570688 TBC1D5Q92609 795 aa13□□□□□ -0.33
ABR-208ENST00000570688 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
ABR-208ENST00000570688 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 TEX13BQ9BXU2 312 aa13□□□□□ -0.33
ABR-208ENST00000570688 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
ABR-208ENST00000570688 TPCN1Q9ULQ1 816 aa13□□□□□ -0.33
ABR-208ENST00000570688 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
ABR-208ENST00000570688 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
ABR-208ENST00000570688 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 NFIBO00712 420 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 ADAMTS3O15072 1205 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 ZBED4O75132 1171 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 ICAM1P05362 532 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 PGK2P07205 417 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 ELNP15502 786 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 MAPK4P31152 587 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 OAZ1P54368 228 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 PLEKHH3Q7Z736 793 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 ALDH8A1Q9H2A2 487 aaPredicted RBP12.99□□□□□ -0.33
ABR-208ENST00000570688 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
ABR-208ENST00000570688 BRCA2P51587 3418 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 ZBTB43O43298 467 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 ALAS1P13196 640 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 ADORA2AP29274 412 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 TYW1BQ6NUM6 668 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
ABR-208ENST00000570688 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 TRIB2Q92519 343 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 A1CFQ9NQ94 594 aaKnown RBP12.98□□□□□ -0.33
ABR-208ENST00000570688 RNF146Q9NTX7 359 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 RBBP6Q7Z6E9 1792 aaKnown RBP12.98□□□□□ -0.33
ABR-208ENST00000570688 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
ABR-208ENST00000570688 KIAA0100Q14667 2235 aaKnown RBP12.97□□□□□ -0.33
ABR-208ENST00000570688 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 SLC25A27O95847 323 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 HOXC6P09630 235 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 FDX1P10109 184 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 CYP2B6P20813 491 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 NEK4P51957 841 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
ABR-208ENST00000570688 CNTN2Q02246 1040 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 IRF5Q13568 498 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 USH1GQ495M9 461 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
ABR-208ENST00000570688 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms