RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 HACL1Q9UJ83 578 aa8.06□□□□□ -1.12
SMG1-215ENST00000568239 ZBTB21Q9ULJ3 1066 aa8.06□□□□□ -1.12
SMG1-215ENST00000568239 LTBP3Q9NS15 1303 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 ZBTB5O15062 677 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 TRAPPC10P48553 1259 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 ZNF165P49910 485 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 ADCY7P51828 1080 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 NONOQ15233 471 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG1-215ENST00000568239 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 CCNT1O60563 726 aaKnown RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 BMP3P12645 472 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 ZNF280AP59817 542 aaPredicted RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 CDC37Q16543 378 aaPredicted RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 USH1GQ495M9 461 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 PRAMEF18Q5VWM3 479 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 DPF2Q92785 391 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 ZBED3Q96IU2 234 aaPredicted RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 KIAA1468Q9P260 1216 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 HPSEQ9Y251 543 aa8.05□□□□□ -1.12
SMG1-215ENST00000568239 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
SMG1-215ENST00000568239 M0R2N6 131 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 PPP1R11O60927 126 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 CAP2P40123 477 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 ATP2C1P98194 919 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 PNOCQ13519 176 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 STX1AQ16623 288 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 UBE2SQ16763 222 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 QRICH1Q2TAL8 776 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 DAGLBQ8NCG7 672 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 RASSF8Q8NHQ8 419 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 TBCKQ8TEA7 893 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 SYMPKQ92797 1274 aaKnown RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 FERMT2Q96AC1 680 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 DHX58Q96C10 678 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 FEZ1Q99689 392 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 DEFB129Q9H1M3 183 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 PCDHA1Q9Y5I3 950 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 COL2A1P02458 1487 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 hCG_1984214I3L0E3 225 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 LMNB1P20700 586 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 CDC25AP30304 524 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 KRBA2Q6ZNG9 492 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 ZNF713Q8N859 430 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 ZNF579Q8NAF0 562 aaKnown RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 GMCL1P1Q8NEA9 526 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 CBX8Q9HC52 389 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 ANO10Q9NW15 660 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 BECN2A8MW95 431 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 FOXN1O15353 648 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 TBC1D12O60347 775 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 ASNSP08243 561 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 FAM83BQ5T0W9 1011 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 ANGEL2Q5VTE6 544 aaKnown RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 C11orf57Q6ZUT1 292 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 NEK8Q86SG6 692 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 CUL5Q93034 780 aa8.04□□□□□ -1.12
SMG1-215ENST00000568239 GLIS2Q9BZE0 524 aaPredicted RBP8.04□□□□□ -1.12
SMG1-215ENST00000568239 GOLGA6L19H0YKK7 550 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
SMG1-215ENST00000568239 MRPL12P52815 198 aaKnown RBP8.03□□□□□ -1.12
SMG1-215ENST00000568239 NBPF12Q5TAG4 269 aaPredicted RBP8.03□□□□□ -1.12
SMG1-215ENST00000568239 SYDE2Q5VT97 1194 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 GRAMD1CQ8IYS0 662 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 KIFC2Q96AC6 838 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 TIGD1Q96MW7 591 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 TMEM60Q9H2L4 133 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 HOOK1Q9UJC3 728 aaKnown RBP8.03□□□□□ -1.12
SMG1-215ENST00000568239 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 ESYT2A0FGR8 921 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 PTMAP06454 111 aaKnown RBP8.03□□□□□ -1.12
SMG1-215ENST00000568239 EPS15P42566 896 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 AFMP43652 599 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 STAT2P52630 851 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 DPCR1Q3MIW9 517 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 KIAA1755Q5JYT7 1200 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 USP17L6PQ6QN14 398 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 CEP57L1Q8IYX8 460 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 TRPM4Q8TD43 1214 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 ZNF341Q9BYN7 854 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 RNF181Q9P0P0 153 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms