RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 SLC9C2Q5TAH2 1124 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 CNGA4Q8IV77 575 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ZNF579Q8NAF0 562 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 FAM76AQ8TAV0 307 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 CABS1Q96KC9 395 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 CDC5LQ99459 802 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SAMSN1Q9NSI8 373 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 GNL3LQ9NVN8 582 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ARFGEF1Q9Y6D6 1849 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 TMCO5BA8MYB1 307 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 GOLGA8KD6RF30 607 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 FOXN1O15353 648 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 HMGB2P26583 209 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 MARCKSP29966 332 aaPredicted RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ANTXR2P58335 489 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 POSTNQ15063 836 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 C11orf91Q3C1V1 193 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 MAGEC3Q8TD91 643 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 GLMNQ92990 594 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 BSDC1Q9NW68 430 aaPredicted RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 REXO2Q9Y3B8 237 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ADAMTSL1Q8N6G6 1762 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SCN9AQ15858 1988 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 NID2Q14112 1375 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 MAST3O60307 1309 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ZPR1O75312 459 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 RASSF9O75901 435 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 INPP5BP32019 993 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 MRPL12P52815 198 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ITIH3Q06033 890 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SCARF1Q14162 830 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SPATA1Q5VX52 437 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 STK11IPQ8N1F8 1099 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 EFCAB3Q8N7B9 438 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 TBC1D22AQ8WUA7 517 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 CTAGE1Q96RT6 745 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 PLCD4Q9BRC7 762 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 CAPS2Q9BXY5 557 aa6.12□□□□□ -1.43
LINC01541-202ENST00000568095 HOOK1Q9UJC3 728 aaKnown RBP6.12□□□□□ -1.43
LINC01541-202ENST00000568095 PDS5AQ29RF7 1337 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 NAV1Q8NEY1 1877 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 DPYSL4O14531 572 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 APBA3O96018 575 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 TNFRSF8P28908 595 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 HOXA10P31260 410 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 FXR1P51114 621 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MNAT1P51948 309 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 TTLL5Q6EMB2 1281 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 NCAPH2Q6IBW4 605 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 B4GALNT4Q76KP1 1039 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 SH3RF1Q7Z6J0 888 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 VPS37DQ86XT2 251 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 RIN2Q8WYP3 895 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MIEF2Q96C03 454 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 SETDB2Q96T68 719 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 SELENOOQ9BVL4 669 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 GPHNQ9NQX3 736 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 GJB4Q9NTQ9 266 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 ABHD10Q9NUJ1 306 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 FBXO2Q9UK22 296 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 PCDHB8Q9UN66 801 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 PCDHB13Q9Y5F0 798 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 GOLGA6CA6NDK9 693 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 CHUKO15111 745 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MEFVO15553 781 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 TBC1D12O60347 775 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 APPP05067 770 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 GOLGA6DP0CG33 693 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MYBL2P10244 700 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 PTPREP23469 700 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 CASP14P31944 242 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 RFC4P35249 363 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MCAMP43121 646 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 TIMM10P62072 90 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 PUM3Q15397 648 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 TTC39AQ5SRH9 613 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 C15orf52Q6ZUT6 534 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 CELF1Q92879 486 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 FAXDC2Q96IV6 333 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 MMS19Q96T76 1030 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 GOLGA6AQ9NYA3 693 aa6.11□□□□□ -1.43
LINC01541-202ENST00000568095 LIMA1Q9UHB6 759 aaKnown RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 IQSEC3Q9UPP2 1182 aaPredicted RBP6.11□□□□□ -1.43
LINC01541-202ENST00000568095 SMTNP53814 917 aa6.1□□□□□ -1.43
LINC01541-202ENST00000568095 TRIM14Q14142 442 aa6.1□□□□□ -1.43
LINC01541-202ENST00000568095 NEDD9Q14511 834 aa6.1□□□□□ -1.43
LINC01541-202ENST00000568095 EZH2Q15910 746 aaKnown RBP6.1□□□□□ -1.43
LINC01541-202ENST00000568095 CHADLQ6NUI6 762 aa6.1□□□□□ -1.43
LINC01541-202ENST00000568095 KANK3Q6NY19 840 aa6.1□□□□□ -1.43
LINC01541-202ENST00000568095 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
LINC01541-202ENST00000568095 CYP26C1Q6V0L0 522 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms