RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 LONP1P36776 959 aaKnown RBP20.05■□□□□ 0.8
CMTM3-214ENST00000567572 E2F4Q16254 413 aa20.05■□□□□ 0.8
CMTM3-214ENST00000567572 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
CMTM3-214ENST00000567572 RMND1Q9NWS8 449 aa20.05■□□□□ 0.8
CMTM3-214ENST00000567572 PCDHAC2Q9Y5I4 1007 aa20.05■□□□□ 0.8
CMTM3-214ENST00000567572 ITIH6Q6UXX5 1313 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 SPAG1Q07617 926 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 FILIP1LQ4L180 1135 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 IDI2Q9BXS1 227 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 EHD4Q9H223 541 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 SIPA1L1O43166 1804 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 GREB1LQ9C091 1923 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 GTPBP6O43824 516 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 TXLNAP40222 546 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 ZNF174Q15697 407 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 APTXQ7Z2E3 356 aaKnown RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 TRMT44Q8IYL2 757 aaKnown RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 DAGLBQ8NCG7 672 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 CCDC51Q96ER9 411 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 LZTS2Q9BRK4 669 aa20.04■□□□□ 0.8
CMTM3-214ENST00000567572 SAMSN1Q9NSI8 373 aaKnown RBP20.04■□□□□ 0.8
CMTM3-214ENST00000567572 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CMTM3-214ENST00000567572 HLA-DOAP06340 250 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 TPM1P09493 284 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 SHMT1P34896 483 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 PBX1P40424 430 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 CCDC148Q8NFR7 591 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 PKNOX2Q96KN3 472 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 ARID3AQ99856 593 aa20.03■□□□□ 0.8
CMTM3-214ENST00000567572 GOLGB1Q14789 3259 aaKnown RBP20.03■□□□□ 0.8
CMTM3-214ENST00000567572 AKR1B15C9JRZ8 316 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-214ENST00000567572 MYL1P05976 194 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 AKR1B1P15121 316 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 VEGFAP15692 232 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-214ENST00000567572 ELF2Q15723 593 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 BLIDQ8IZY5 108 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 GTPBP4Q9BZE4 634 aaKnown RBP20.02■□□□□ 0.8
CMTM3-214ENST00000567572 MTMR4Q9NYA4 1195 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
CMTM3-214ENST00000567572 PCDHA4Q9UN74 947 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 COL4A5P29400 1685 aa20.02■□□□□ 0.8
CMTM3-214ENST00000567572 PPP1R3GB7ZBB8 358 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 CYTH3O43739 400 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 AFMP43652 599 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 NAA30Q147X3 362 aaPredicted RBP20.02■□□□□ 0.79
CMTM3-214ENST00000567572 PDXDC2PQ6P474 469 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 PIK3AP1Q6ZUJ8 805 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.79
CMTM3-214ENST00000567572 BAZ2BQ9UIF8 2168 aaKnown RBP20.02■□□□□ 0.79
CMTM3-214ENST00000567572 LAD1O00515 517 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 RBM5P52756 815 aaKnown RBP eCLIP20.01■□□□□ 0.79
CMTM3-214ENST00000567572 CBX1P83916 185 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 KMT5BQ4FZB7 885 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 RASGRP2Q7LDG7 609 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 CCDC125Q86Z20 511 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 SPZ1Q9BXG8 430 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 DHX36Q9H2U1 1008 aaKnown RBP20.01■□□□□ 0.79
CMTM3-214ENST00000567572 RWDD2AQ9UIY3 292 aa20.01■□□□□ 0.79
CMTM3-214ENST00000567572 WNT7AO00755 349 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 H2AFXP16104 143 aaPredicted RBP20■□□□□ 0.79
CMTM3-214ENST00000567572 FECHP22830 423 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 CACNB3P54284 484 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 PPFIBP1Q86W92 1011 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 ZMYND15Q9H091 742 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 LRRC10BA6NIK2 292 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 KLRF2D3W0D1 207 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 PARP1P09874 1014 aaKnown RBP20■□□□□ 0.79
CMTM3-214ENST00000567572 CD44P16070 742 aaKnown RBP20■□□□□ 0.79
CMTM3-214ENST00000567572 TRIM14Q14142 442 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 CNGA4Q8IV77 575 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 ANKRD20A12PQ8NF67 263 aa20■□□□□ 0.79
CMTM3-214ENST00000567572 LIMA1Q9UHB6 759 aaKnown RBP20■□□□□ 0.79
CMTM3-214ENST00000567572 EFCAB8A8MWE9 144 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 CCDC175P0C221 793 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 GOLGA8HP0CJ92 632 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 SMARCA1P28370 1054 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 ZNF658Q5TYW1 1059 aaPredicted RBP19.99■□□□□ 0.79
CMTM3-214ENST00000567572 FBXO38Q6PIJ6 1188 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 VPS33BQ9H267 617 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 DNAJC18Q9H819 358 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
CMTM3-214ENST00000567572 M0R2N6 131 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 DMTNQ08495 405 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 C4orf32Q8N8J7 132 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 GPKOWQ92917 476 aaPredicted RBP eCLIP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 MAGEF1Q9HAY2 307 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 FAM53CQ9NYF3 392 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 COL2A1P02458 1487 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 DDTLA6NHG4 134 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 PRPHP41219 470 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 GABPB1Q06547 395 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 PAK1Q13153 545 aa19.98■□□□□ 0.79
CMTM3-214ENST00000567572 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
CMTM3-214ENST00000567572 WWC2Q6AWC2 1192 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms