RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 HOMER2Q9NSB8 354 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
FANCA-220ENST00000566409 LCTP09848 1927 aa17.28■□□□□ 0.36
FANCA-220ENST00000566409 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
FANCA-220ENST00000566409 MAMDC4Q6UXC1 1216 aa17.28■□□□□ 0.36
FANCA-220ENST00000566409 BTNL9Q6UXG8 535 aa17.28■□□□□ 0.36
FANCA-220ENST00000566409 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
FANCA-220ENST00000566409 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
FANCA-220ENST00000566409 SYN1P17600 705 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 SLC16A2P36021 539 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 CNTN2Q02246 1040 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 ANKRD35Q8N283 1001 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 TTC14Q96N46 770 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 RNF41Q9H4P4 317 aaPredicted RBP17.27■□□□□ 0.36
FANCA-220ENST00000566409 FBXO40Q9UH90 709 aa17.27■□□□□ 0.36
FANCA-220ENST00000566409 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
FANCA-220ENST00000566409 SYNGAP1Q96PV0 1343 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 KDM4AO75164 1064 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 PDHBP11177 359 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 LRRC41Q15345 812 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 ZNF467Q7Z7K2 595 aaPredicted RBP17.26■□□□□ 0.35
FANCA-220ENST00000566409 MSL3Q8N5Y2 521 aaKnown RBP17.26■□□□□ 0.35
FANCA-220ENST00000566409 FAM133AQ8N9E0 248 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 ESR2Q92731 530 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 LENG1Q96BZ8 264 aaPredicted RBP17.26■□□□□ 0.35
FANCA-220ENST00000566409 TRERF1Q96PN7 1200 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 GDF15Q99988 308 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 ACAD9Q9H845 621 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
FANCA-220ENST00000566409 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
FANCA-220ENST00000566409 B4E1Z4 1266 aa17.25■□□□□ 0.35
FANCA-220ENST00000566409 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
FANCA-220ENST00000566409 ALAS1P13196 640 aa17.25■□□□□ 0.35
FANCA-220ENST00000566409 CHMLP26374 656 aa17.25■□□□□ 0.35
FANCA-220ENST00000566409 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
FANCA-220ENST00000566409 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
FANCA-220ENST00000566409 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
FANCA-220ENST00000566409 ASTN1O14525 1302 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 ADCY6O43306 1168 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 ZNF543Q08ER8 600 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
FANCA-220ENST00000566409 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 KATNBL1Q9H079 304 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 XPNPEP3Q9NQH7 507 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
FANCA-220ENST00000566409 PGK1P00558 417 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
FANCA-220ENST00000566409 ICAM1P05362 532 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 RARBP10826 455 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 AKR1A1P14550 325 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 PTH1RQ03431 593 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 TKFCQ3LXA3 575 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
FANCA-220ENST00000566409 CTNNA3Q9UI47 895 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
FANCA-220ENST00000566409 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
FANCA-220ENST00000566409 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
FANCA-220ENST00000566409 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 MAGEA10P43363 369 aaPredicted RBP17.22■□□□□ 0.35
FANCA-220ENST00000566409 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 ARMCX2Q7L311 632 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 ENAHQ8N8S7 591 aaPredicted RBP17.22■□□□□ 0.35
FANCA-220ENST00000566409 FERMT2Q96AC1 680 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
FANCA-220ENST00000566409 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
FANCA-220ENST00000566409 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 CYP39A1Q9NYL5 469 aa17.22■□□□□ 0.35
FANCA-220ENST00000566409 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
FANCA-220ENST00000566409 RAD50Q92878 1312 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 BMP8BP34820 402 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 RTP1P59025 263 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 IRX5P78411 483 aaPredicted RBP17.21■□□□□ 0.35
FANCA-220ENST00000566409 SNX17Q15036 470 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 ABHD16BQ9H3Z7 469 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 PHF24Q9UPV7 400 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 TAF6LQ9Y6J9 622 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 LRRC37A2A6NM11 1700 aa17.21■□□□□ 0.35
FANCA-220ENST00000566409 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.34
FANCA-220ENST00000566409 NFIBO00712 420 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 SGSM2O43147 1006 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 NT5C2P49902 561 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 CCSAPQ6IQ19 270 aaPredicted RBP17.2■□□□□ 0.34
FANCA-220ENST00000566409 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms