RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 IGHMBP2P38935 993 aaKnown RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 TCP10Q12799 353 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 TNFAIP1Q13829 316 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 DBN1Q16643 649 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 SSH3Q8TE77 659 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 TRIB2Q92519 343 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 BADQ92934 168 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 COA7Q96BR5 231 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 ZNF837Q96EG3 531 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 BCL11AQ9H165 835 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 EXOC6BQ9Y2D4 811 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 A0A1B0GUL6 1792 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 FAM205AQ6ZU69 1335 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 REV3LO60673 3130 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 MEN1O00255 615 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 GYG1P46976 350 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 TNNI2P48788 182 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 MMP14P50281 582 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
UBFD1-204ENST00000565634 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 TFF2Q03403 129 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 MFSD14BQ5SR56 506 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
UBFD1-204ENST00000565634 MPHOSPH8Q99549 860 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PRM3Q9NNZ6 103 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PRDM5Q9NQX1 630 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-204ENST00000565634 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 NDUFB9Q9Y6M9 179 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PHIPQ8WWQ0 1821 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PIEZO1Q92508 2521 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 RLFQ13129 1914 aa7.56□□□□□ -1.2
UBFD1-204ENST00000565634 PRRC2BQ5JSZ5 2229 aaKnown RBP7.55□□□□□ -1.2
UBFD1-204ENST00000565634 GRXCR1A8MXD5 290 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 HMGCRP04035 888 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 COL6A1P12109 1028 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 IL1R1P14778 569 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 IGFBP4P22692 258 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 SCTRP47872 440 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 KCNQ1P51787 676 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 EPHB4P54760 987 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 TIMM10P62072 90 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 TFCP2Q12800 502 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 POU4F2Q12837 409 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
UBFD1-204ENST00000565634 MTX1Q13505 466 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 CCL14Q16627 93 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 ZFPM1Q8IX07 1006 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 SMCR8Q8TEV9 937 aaPredicted RBP7.55□□□□□ -1.2
UBFD1-204ENST00000565634 ZNF341Q9BYN7 854 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 ANKRD2Q9GZV1 360 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 PRDM12Q9H4Q4 367 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 DCTPP1Q9H773 170 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 ATP11BQ9Y2G3 1177 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 ZHX2Q9Y6X8 837 aa7.55□□□□□ -1.2
UBFD1-204ENST00000565634 SYNGAP1Q96PV0 1343 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 ANKRD18BA2A2Z9 1011 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 SURF6O75683 361 aaKnown RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 GPC1P35052 558 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 MRE11P49959 708 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 CACNB2Q08289 660 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 IFIT5Q13325 482 aaKnown RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 CCDC57Q2TAC2 916 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 TREML2Q5T2D2 321 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 ANO1Q5XXA6 986 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 LDHAL6AQ6ZMR3 332 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 RPAP2Q8IXW5 612 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 OTUD7AQ8TE49 926 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-204ENST00000565634 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
UBFD1-204ENST00000565634 EYA2O00167 538 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ITGB8P26012 769 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ADORA1P30542 326 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 RTP1P59025 263 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ADGRE1Q14246 886 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 RIPOR1Q6ZS17 1223 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ZNF804AQ7Z570 1209 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 VGLL2Q8N8G2 317 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ATXN2LQ8WWM7 1075 aaKnown RBP7.53□□□□□ -1.2
UBFD1-204ENST00000565634 GMCL1Q96IK5 515 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 C1QTNF1Q9BXJ1 281 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 IL1RAPL2Q9NP60 686 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 THEGQ9P2T0 379 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
UBFD1-204ENST00000565634 DYRK1BQ9Y463 629 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 DNMT3AQ9Y6K1 912 aaPredicted RBP7.53□□□□□ -1.2
UBFD1-204ENST00000565634 MAST2Q6P0Q8 1798 aa7.53□□□□□ -1.2
UBFD1-204ENST00000565634 MYO5AQ9Y4I1 1855 aaKnown RBP7.53□□□□□ -1.2
UBFD1-204ENST00000565634 CDK5RAP2Q96SN8 1893 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 TRIM43BA6NCK2 446 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 TRIM75PA6NK02 468 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms