RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 UBE2Q1Q7Z7E8 422 aa23.28■■□□□ 1.32
CMTM3-207ENST00000564060 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
CMTM3-207ENST00000564060 MSL3Q8N5Y2 521 aaKnown RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 ENAHQ8N8S7 591 aaPredicted RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 NCOA7Q8NI08 942 aa23.28■■□□□ 1.32
CMTM3-207ENST00000564060 RANBP17Q9H2T7 1088 aaKnown RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 GPCPD1Q9NPB8 672 aa23.28■■□□□ 1.32
CMTM3-207ENST00000564060 FRMPD2Q68DX3 1309 aaPredicted RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 MKI67P46013 3256 aaKnown RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 PGK2P07205 417 aa23.27■■□□□ 1.32
CMTM3-207ENST00000564060 CYBAP13498 195 aa23.27■■□□□ 1.32
CMTM3-207ENST00000564060 CNGA1P29973 690 aa23.27■■□□□ 1.32
CMTM3-207ENST00000564060 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.32
CMTM3-207ENST00000564060 ERICH6BQ5W0A0 696 aa23.27■■□□□ 1.32
CMTM3-207ENST00000564060 RBM8AQ9Y5S9 174 aaKnown RBP23.27■■□□□ 1.32
CMTM3-207ENST00000564060 ZNF536O15090 1300 aa23.27■■□□□ 1.32
CMTM3-207ENST00000564060 ERICH2A1L162 156 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 ICAM1P05362 532 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
CMTM3-207ENST00000564060 TTBK2Q6IQ55 1244 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 CCDC174Q6PII3 467 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 NECAB2Q7Z6G3 386 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 TINF2Q9BSI4 451 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 HOMER2Q9NSB8 354 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 DDX20Q9UHI6 824 aaKnown RBP23.26■■□□□ 1.31
CMTM3-207ENST00000564060 CCPG1Q9ULG6 757 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 MCM3APO60318 1980 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 SMCHD1A6NHR9 2005 aa23.26■■□□□ 1.31
CMTM3-207ENST00000564060 DNAJC25-GNG10A0A024R161 153 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 E7EWF7 191 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 ALAS1P13196 640 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 SLC16A2P36021 539 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 ZNF467Q7Z7K2 595 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-207ENST00000564060 AGBL1Q96MI9 1066 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 PFASO15067 1338 aa23.25■■□□□ 1.31
CMTM3-207ENST00000564060 SEPT4O43236 478 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 CDC45O75419 566 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 LHX8Q68G74 356 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 LSG1Q9H089 658 aaKnown RBP23.24■■□□□ 1.31
CMTM3-207ENST00000564060 ANO2Q9NQ90 1003 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 SYNGAP1Q96PV0 1343 aa23.24■■□□□ 1.31
CMTM3-207ENST00000564060 PAWRQ96IZ0 340 aaKnown RBP23.23■■□□□ 1.31
CMTM3-207ENST00000564060 CNPY2Q9Y2B0 182 aa23.23■■□□□ 1.31
CMTM3-207ENST00000564060 ALPK3Q96L96 1907 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
CMTM3-207ENST00000564060 SEC23AQ15436 765 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 MAMDC4Q6UXC1 1216 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 CYB5R4Q7L1T6 521 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 WDR19Q8NEZ3 1342 aa23.22■■□□□ 1.31
CMTM3-207ENST00000564060 POTEB2H3BUK9 544 aa23.21■■□□□ 1.31
CMTM3-207ENST00000564060 IFIT3O14879 490 aaKnown RBP23.21■■□□□ 1.31
CMTM3-207ENST00000564060 SNAP25P60880 206 aa23.21■■□□□ 1.31
CMTM3-207ENST00000564060 RNF20Q5VTR2 975 aa23.21■■□□□ 1.31
CMTM3-207ENST00000564060 DPF3Q92784 378 aa23.21■■□□□ 1.31
CMTM3-207ENST00000564060 C11orf49Q9H6J7 331 aa23.21■■□□□ 1.31
CMTM3-207ENST00000564060 A1CFQ9NQ94 594 aaKnown RBP23.21■■□□□ 1.31
CMTM3-207ENST00000564060 WTAPQ15007 396 aa23.2■■□□□ 1.3
CMTM3-207ENST00000564060 MTA3Q9BTC8 594 aa23.2■■□□□ 1.3
CMTM3-207ENST00000564060 PPP4R2Q9NY27 417 aa23.2■■□□□ 1.3
CMTM3-207ENST00000564060 LCTP09848 1927 aa23.2■■□□□ 1.3
CMTM3-207ENST00000564060 GOLGA8HP0CJ92 632 aa23.19■■□□□ 1.3
CMTM3-207ENST00000564060 STOX1Q6ZVD7 989 aa23.19■■□□□ 1.3
CMTM3-207ENST00000564060 ARRDC4Q8NCT1 418 aa23.19■■□□□ 1.3
CMTM3-207ENST00000564060 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
CMTM3-207ENST00000564060 SLC27A2O14975 620 aa23.18■■□□□ 1.3
CMTM3-207ENST00000564060 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
CMTM3-207ENST00000564060 PRAMEF19Q5SWL8 479 aa23.18■■□□□ 1.3
CMTM3-207ENST00000564060 MB21D2Q8IYB1 491 aaPredicted RBP23.18■■□□□ 1.3
CMTM3-207ENST00000564060 FAM133AQ8N9E0 248 aa23.18■■□□□ 1.3
CMTM3-207ENST00000564060 NR2E3Q9Y5X4 410 aa23.18■■□□□ 1.3
CMTM3-207ENST00000564060 ASB14A6NK59 587 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 DNM1LO00429 736 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 DHX16O60231 1041 aaKnown RBP23.17■■□□□ 1.3
CMTM3-207ENST00000564060 RARBP10826 455 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 AKR1A1P14550 325 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 MNX1P50219 401 aaPredicted RBP23.17■■□□□ 1.3
CMTM3-207ENST00000564060 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 CREB3L3Q68CJ9 461 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 UBA5Q9GZZ9 404 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 ABHD16BQ9H3Z7 469 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 CYP39A1Q9NYL5 469 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 TAF6LQ9Y6J9 622 aa23.17■■□□□ 1.3
CMTM3-207ENST00000564060 MCM5P33992 734 aa23.16■■□□□ 1.3
CMTM3-207ENST00000564060 CDC37Q16543 378 aaPredicted RBP23.16■■□□□ 1.3
CMTM3-207ENST00000564060 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
CMTM3-207ENST00000564060 MAF1Q9H063 256 aa23.16■■□□□ 1.3
CMTM3-207ENST00000564060 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.16■■□□□ 1.3
CMTM3-207ENST00000564060 LRRC37A2A6NM11 1700 aa23.16■■□□□ 1.3
CMTM3-207ENST00000564060 LOC102724159A0A0B4J2E5 919 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 KBTBD13C9JR72 458 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 EVI5O60447 810 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 ZNF865P0CJ78 1059 aaPredicted RBP23.15■■□□□ 1.3
CMTM3-207ENST00000564060 PWP2Q15269 919 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms