RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ARRDC4Q8NCT1 418 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 ISY1Q9ULR0 285 aaKnown RBP18.46■□□□□ 0.55
USB1-208ENST00000563207 MTMR7Q9Y216 660 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
USB1-208ENST00000563207 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
USB1-208ENST00000563207 ADCY6O43306 1168 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 ZBED4O75132 1171 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 TRIM60Q495X7 471 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 Q7L0L9 218 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 SH3RF1Q7Z6J0 888 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 DIS3Q9Y2L1 958 aaKnown RBP18.45■□□□□ 0.54
USB1-208ENST00000563207 ZNF536O15090 1300 aa18.45■□□□□ 0.54
USB1-208ENST00000563207 TSPY2A6NKD2 308 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 KBTBD13C9JR72 458 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 ATP2A1O14983 1001 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 EPB41L2O43491 1005 aaKnown RBP18.44■□□□□ 0.54
USB1-208ENST00000563207 FGRP09769 529 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 TDHQ8IZJ6 230 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 RNF41Q9H4P4 317 aaPredicted RBP18.44■□□□□ 0.54
USB1-208ENST00000563207 XPNPEP3Q9NQH7 507 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
USB1-208ENST00000563207 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
USB1-208ENST00000563207 REC8O95072 547 aa18.43■□□□□ 0.54
USB1-208ENST00000563207 CNTN2Q02246 1040 aa18.43■□□□□ 0.54
USB1-208ENST00000563207 PTH1RQ03431 593 aa18.43■□□□□ 0.54
USB1-208ENST00000563207 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
USB1-208ENST00000563207 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
USB1-208ENST00000563207 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 ORC4O43929 436 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 PTGS1P23219 599 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 COPB2P35606 906 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 HAND2P61296 217 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 AKNAD1Q5T1N1 836 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 TTBK2Q6IQ55 1244 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 STAG1Q8WVM7 1258 aa18.42■□□□□ 0.54
USB1-208ENST00000563207 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
USB1-208ENST00000563207 TRIM43BA6NCK2 446 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 ADAMTS4O75173 837 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 RARBP10826 455 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 ITGB8P26012 769 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 SLC1A4P43007 532 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 SNX17Q15036 470 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
USB1-208ENST00000563207 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 MAMDC4Q6UXC1 1216 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 TRIM43Q96BQ3 446 aaPredicted RBP18.41■□□□□ 0.54
USB1-208ENST00000563207 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 PURBQ96QR8 312 aaKnown RBP18.41■□□□□ 0.54
USB1-208ENST00000563207 PRDM5Q9NQX1 630 aaPredicted RBP18.41■□□□□ 0.54
USB1-208ENST00000563207 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
USB1-208ENST00000563207 SYNPO2Q9UMS6 1093 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 PHF24Q9UPV7 400 aa18.41■□□□□ 0.54
USB1-208ENST00000563207 SLC16A2P36021 539 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 NOVP48745 357 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 STAT2P52630 851 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
USB1-208ENST00000563207 LRIT3Q3SXY7 679 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 MUM1L1Q5H9M0 696 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 TOMM22Q9NS69 142 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 NRBP1Q9UHY1 535 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
USB1-208ENST00000563207 LCTP09848 1927 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 ASTN1O14525 1302 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 SYNRGQ9UMZ2 1314 aa18.4■□□□□ 0.54
USB1-208ENST00000563207 SOWAHBA6NEL2 793 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 AKR1A1P14550 325 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 TLE2Q04725 743 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.53
USB1-208ENST00000563207 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 BADQ92934 168 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 A1CFQ9NQ94 594 aaKnown RBP18.39■□□□□ 0.53
USB1-208ENST00000563207 PDLIM7Q9NR12 457 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
USB1-208ENST00000563207 SYNGAP1Q96PV0 1343 aa18.39■□□□□ 0.53
USB1-208ENST00000563207 A0A1W2PQ45 241 aaPredicted RBP18.38■□□□□ 0.53
USB1-208ENST00000563207 A0A1W2PQY0 241 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 ALAS1P13196 640 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 OAZ1P54368 228 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 C9orf50Q5SZB4 431 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 TMEM63BQ5T3F8 832 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 CCSAPQ6IQ19 270 aaPredicted RBP18.38■□□□□ 0.53
USB1-208ENST00000563207 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms