RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 NUP88Q99567 741 aaPredicted RBP8.16□□□□□ -1.1
SPG11-224ENST00000561268 GDF15Q99988 308 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 MKNK2Q9HBH9 465 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 SLC38A10Q9HBR0 1119 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 BAZ2BQ9UIF8 2168 aaKnown RBP8.16□□□□□ -1.1
SPG11-224ENST00000561268 PTPRSQ13332 1948 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 WDR81Q562E7 1941 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 DOCK5Q9H7D0 1870 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 ZNF536O15090 1300 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 SYNGAP1Q96PV0 1343 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 DNM1LO00429 736 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 TFRCP02786 760 aaKnown RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 FDX1P10109 184 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 HSPD1P10809 573 aaKnown RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 CYP2C19P33261 490 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 NMIQ13287 307 aaPredicted RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 MCMDC2Q4G0Z9 681 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 MAMDC4Q6UXC1 1216 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 ZNF467Q7Z7K2 595 aaPredicted RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 LRRC47Q8N1G4 583 aaKnown RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 PRPF38AQ8NAV1 312 aaKnown RBP8.15□□□□□ -1.1
SPG11-224ENST00000561268 C11orf49Q9H6J7 331 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 TCP11L1Q9NUJ3 509 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 FEM1BQ9UK73 627 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 NR2E3Q9Y5X4 410 aa8.15□□□□□ -1.1
SPG11-224ENST00000561268 RAD50Q92878 1312 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 FGAP02671 866 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 SLC3A2P08195 630 aaKnown RBP8.14□□□□□ -1.11
SPG11-224ENST00000561268 TSPY3P0CV98 308 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 TSPY8P0CW00 308 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 SNHG28P0DPA3 235 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 FCER1AP12319 257 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 BMP8BP34820 402 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 STAT3P40763 770 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 STAT2P52630 851 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 BECN1Q14457 450 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 C1orf53Q5VUE5 145 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 RCSD1Q6JBY9 416 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 BTNL9Q6UXG8 535 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 RASGRP2Q7LDG7 609 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 NCAPG2Q86XI2 1143 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 TBC1D10CQ8IV04 446 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 ZNF444Q8N0Y2 327 aaPredicted RBP8.14□□□□□ -1.11
SPG11-224ENST00000561268 STAG1Q8WVM7 1258 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 KATNBL1Q9H079 304 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
SPG11-224ENST00000561268 SLC5A4Q9NY91 659 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 RBM27Q9P2N5 1060 aaKnown RBP8.14□□□□□ -1.11
SPG11-224ENST00000561268 RIPK3Q9Y572 518 aa8.14□□□□□ -1.11
SPG11-224ENST00000561268 SCN5AQ14524 2016 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 ASTN1O14525 1302 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 NEDD4P46934 1319 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 EVI5O60447 810 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 ADAMTS4O75173 837 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 APPP05067 770 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 ZNF865P0CJ78 1059 aaPredicted RBP8.13□□□□□ -1.11
SPG11-224ENST00000561268 BMP3P12645 472 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 SDSP20132 328 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 NKX3-2P78367 333 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 TFAP4Q01664 338 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 LRRC26Q2I0M4 334 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 FAM47AQ5JRC9 791 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 WDR78Q5VTH9 848 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 SNRNP48Q6IEG0 339 aaKnown RBP8.13□□□□□ -1.11
SPG11-224ENST00000561268 DPP9Q86TI2 863 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 CHST13Q8NET6 341 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 MMP19Q99542 508 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 TINF2Q9BSI4 451 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 DSCC1Q9BVC3 393 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 IL25Q9H293 177 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
SPG11-224ENST00000561268 CLIP2Q9UDT6 1046 aa8.13□□□□□ -1.11
SPG11-224ENST00000561268 TRIP12Q14669 1992 aaPredicted RBP8.13□□□□□ -1.11
SPG11-224ENST00000561268 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 TSPY2A6NKD2 308 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 NMT2O60551 498 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 GSPT1P15170 499 aaKnown RBP8.12□□□□□ -1.11
SPG11-224ENST00000561268 CST5P28325 142 aaPredicted RBP8.12□□□□□ -1.11
SPG11-224ENST00000561268 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
SPG11-224ENST00000561268 PLS1Q14651 629 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 KCTD2Q14681 263 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 TKFCQ3LXA3 575 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 SLFN13Q68D06 897 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 DCAF4Q8WV16 495 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 DPF3Q92784 378 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 RANBP17Q9H2T7 1088 aaKnown RBP8.12□□□□□ -1.11
SPG11-224ENST00000561268 UPF2Q9HAU5 1272 aaKnown RBP8.12□□□□□ -1.11
SPG11-224ENST00000561268 FBXO40Q9UH90 709 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 SIP14410 1827 aa8.12□□□□□ -1.11
SPG11-224ENST00000561268 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 HIP1O00291 1037 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 ADCY6O43306 1168 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms