RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
SNX1-212ENST00000560861 RILPL1Q5EBL4 403 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
SNX1-212ENST00000560861 FAM160B2Q86V87 743 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 CCDC12Q8WUD4 166 aaPredicted RBP12.97□□□□□ -0.33
SNX1-212ENST00000560861 COA7Q96BR5 231 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 SPATA32Q96LK8 384 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 FEZ1Q99689 392 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
SNX1-212ENST00000560861 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 PCDHA6Q9UN73 950 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 PCDHA8Q9Y5H6 950 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
SNX1-212ENST00000560861 C19orf81C9J6K1 198 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 WNT7AO00755 349 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 RAD21O60216 631 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
SNX1-212ENST00000560861 VCAM1P19320 739 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 STAT2P52630 851 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 USP14P54578 494 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 UBE2HP62256 183 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 PRKG1Q13976 671 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 SLC39A14Q15043 492 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 C6orf50Q9HD87 102 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.33
SNX1-212ENST00000560861 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
SNX1-212ENST00000560861 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.34
SNX1-212ENST00000560861 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
SNX1-212ENST00000560861 SMCO2A6NFE2 343 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 MBD3O95983 291 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
SNX1-212ENST00000560861 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
SNX1-212ENST00000560861 SNAP25P60880 206 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
SNX1-212ENST00000560861 SF3A1Q15459 793 aaKnown RBP12.95□□□□□ -0.34
SNX1-212ENST00000560861 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 RIC8AQ9NPQ8 531 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 MYH7BA7E2Y1 1941 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
SNX1-212ENST00000560861 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 TRAF5O00463 557 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 OPLAHO14841 1288 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 EDIL3O43854 480 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 GNA11P29992 359 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 NF2P35240 595 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 ADCY7P51828 1080 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.348e-16■■■■■ 29.9
SNX1-212ENST00000560861 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 FBXO11Q86XK2 927 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 AMNQ9BXJ7 453 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 NMRK2Q9NPI5 230 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 PCDHB6Q9Y5E3 794 aa12.94□□□□□ -0.34
SNX1-212ENST00000560861 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
SNX1-212ENST00000560861 ZNF536O15090 1300 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 SPTLC2O15270 562 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PPP6R2O75170 966 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
SNX1-212ENST00000560861 HMGCS2P54868 508 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PPATQ06203 517 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 STK38Q15208 465 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 TEX2Q8IWB9 1127 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
SNX1-212ENST00000560861 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 KCNG4Q8TDN1 519 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 SLF1Q9BQI6 1058 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
SNX1-212ENST00000560861 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PPP1R9AQ9ULJ8 1098 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 ADAMTS5Q9UNA0 930 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 KCNH4Q9UQ05 1017 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 CSADQ9Y600 493 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 PCNTO95613 3336 aa12.93□□□□□ -0.34
SNX1-212ENST00000560861 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 GHRHRQ02643 423 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms