RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SCLT1Q96NL6 688 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 GBP4Q96PP9 640 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TACO1Q9BSH4 297 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 MAK16Q9BXY0 300 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 BRMS1Q9HCU9 246 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TRPV5Q9NQA5 729 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 SEC31BQ9NQW1 1179 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 SMC4Q9NTJ3 1288 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 C6orf203Q9P0P8 240 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TPCN1Q9ULQ1 816 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 ANKRD18BA2A2Z9 1011 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 SMTNL1A8MU46 457 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 WDR64B1ANS9 1081 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 KLF4O43474 513 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 MTRF1O75570 445 aaKnown RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 BBOX1O75936 387 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 WISP1O95388 367 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 NAT2P11245 290 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 NCAM1P13591 858 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATF7P17544 494 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 HOXD10P28358 340 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 MZF1P28698 734 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARL4DP49703 201 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 KRT72Q14CN4 511 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 TKFCQ3LXA3 575 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 COX20Q5RI15 118 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 DACT2Q5SW24 774 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 MFSD4BQ5TF39 518 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ANO1Q5XXA6 986 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 MZT2BQ6NZ67 158 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 KSR2Q6VAB6 950 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ANKS3Q6ZW76 656 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 KRT26Q7Z3Y9 468 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 NCAPG2Q86XI2 1143 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 SPICE1Q8N0Z3 855 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 TMC1Q8TDI8 760 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 CRELD1Q96HD1 420 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 RNF208Q9H0X6 261 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 RWDD1Q9H446 243 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 DEF6Q9H4E7 631 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 RPAP3Q9H6T3 665 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 EXOC1Q9NV70 894 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZMAT5Q9UDW3 170 aaKnown RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 CTNNA3Q9UI47 895 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 PNMA8BQ9ULN7 279 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 HIF3AQ9Y2N7 669 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATP8A1Q9Y2Q0 1164 aa5.21□□□□□ -1.58
HMGB3P26-201ENST00000560051 PRR19A6NJB7 356 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 C19orf81C9J6K1 198 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 K7ENM7 598 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 KCNQ2O43526 872 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 NDUFB5O43674 189 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 PPFIA2O75334 1257 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 FAM13AO94988 1023 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 SCGB1D2O95969 90 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 SRGNP10124 158 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 RXRBP28702 533 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 ETFBP38117 255 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 SARSP49591 514 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCT2P78371 535 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATP11AP98196 1134 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 PURAQ00577 322 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 LMNB2Q03252 620 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 RAB33AQ14088 237 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 TOMM20Q15388 145 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 DNAJC21Q5F1R6 531 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 C16orf46Q6P387 395 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 ABRAXAS1Q6UWZ7 409 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 KIAA1211Q6ZU35 1233 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 OR8H2Q8N162 312 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 WDR66Q8TBY9 1149 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 SPATA18Q8TC71 538 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 RTF1Q92541 710 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 GPRASP2Q96D09 838 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 MRPL9Q9BYD2 267 aaKnown RBP5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 TRIM8Q9BZR9 551 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 PDRG1Q9NUG6 133 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 QPCTLQ9NXS2 382 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 KCNK4Q9NYG8 393 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 LUZP4Q9P127 313 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 PIM2Q9P1W9 311 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 TAGLN3Q9UI15 199 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 LEMD3Q9Y2U8 911 aa5.2□□□□□ -1.58
HMGB3P26-201ENST00000560051 GPR182O15218 404 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SSBP05455 408 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RAC2P15153 192 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RPS2P15880 293 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 XBP1P17861 261 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 GNA15P30679 374 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 CTNNA1P35221 906 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 HTR3AP46098 478 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCT5P48643 541 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 UBXN2AP68543 259 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 GPSM2P81274 684 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZBED6P86452 979 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 PLIN5Q00G26 463 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATP2B2Q01814 1243 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms