RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CEP120Q8N960 986 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 TGFBRAP1Q8WUH2 860 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 TDRD3Q9H7E2 651 aaKnown RBP4.74□□□□□ -1.65
ZEB1-212ENST00000558655 ZSWIM4Q9H7M6 989 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 CNNM2Q9H8M5 875 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 ZSWIM6Q9HCJ5 1215 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 CUEDC1Q9NWM3 386 aaPredicted RBP4.74□□□□□ -1.65
ZEB1-212ENST00000558655 PALD1Q9ULE6 856 aa4.74□□□□□ -1.65
ZEB1-212ENST00000558655 MRPL42Q9Y6G3 142 aaKnown RBP4.74□□□□□ -1.65
ZEB1-212ENST00000558655 ZNF213O14771 459 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 NTRK1P04629 796 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 SLC3A2P08195 630 aaKnown RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 ABL2P42684 1182 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 EVCP57679 992 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 EXOSC10Q01780 885 aaKnown RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 CCDC178Q5BJE1 867 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 CST9Q5W186 159 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 STOX1Q6ZVD7 989 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TBC1D10CQ8IV04 446 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 SDR42E1Q8WUS8 393 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TMEM121BQ9BXQ6 578 aaPredicted RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 KRT23Q9C075 422 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 ZNF287Q9HBT7 754 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 PI4KBQ9UBF8 816 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TACC3Q9Y6A5 838 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 USP17L12C9JPN9 530 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 USP17L21D6R901 530 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 E7EWF7 191 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 HLA-DOAP06340 250 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 ZKSCAN1P17029 563 aaPredicted RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TDO2P48775 406 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 RCAN1P53805 252 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 POU5F1Q01860 360 aaKnown RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 RABEP1Q15276 862 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TBC1D10BQ4KMP7 808 aaPredicted RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 PPP4R3BQ5MIZ7 849 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 NT5DC4Q86YG4 428 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 MAPKAPK5Q8IW41 473 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TMC2Q8TDI7 906 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TNPO1Q92973 898 aaKnown RBP4.73□□□□□ -1.65
ZEB1-212ENST00000558655 CCDC17Q96LX7 622 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TTC14Q96N46 770 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 LRRC27Q9C0I9 530 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 TSKSQ9UJT2 592 aa4.73□□□□□ -1.65
ZEB1-212ENST00000558655 C2orf72A6NCS6 295 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DDTLA6NHG4 134 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 S100BP04271 92 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PSMA5P28066 241 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SHMT1P34896 483 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 TERF1P54274 439 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 MARSP56192 900 aaKnown RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DHX8Q14562 1220 aaKnown RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SETDB1Q15047 1291 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 TTC39BQ5VTQ0 682 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 ZFPM1Q8IX07 1006 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PDILTQ8N807 584 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 NEDD1Q8NHV4 660 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SNX21Q969T3 373 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DNAJC18Q9H819 358 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 MCM9Q9NXL9 1143 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DDX56Q9NY93 547 aaKnown RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 MYH15Q9Y2K3 1946 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PHF20L1A8MW92 1017 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 CYP2D6P10635 497 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 RASA1P20936 1047 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SDHBP21912 280 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 FECHP22830 423 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 RPS6KB1P23443 525 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 CDK8P49336 464 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PLCD1P51178 756 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 RBM5P52756 815 aaKnown RBP eCLIP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 INHBEP58166 350 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SMAD3P84022 425 aaKnown RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PDE4BQ07343 736 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SREBF2Q12772 1141 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 RASA3Q14644 834 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PPP1R15BQ5SWA1 713 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 ANGEL2Q5VTE6 544 aaKnown RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DCAF15Q66K64 600 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 FILIP1Q7Z7B0 1213 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 NCOA7Q8NI08 942 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 MKL1Q969V6 931 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 TMEM87BQ96K49 555 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 MAP3K14Q99558 947 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 TINF2Q9BSI4 451 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 DEFB129Q9H1M3 183 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 POLR3EQ9NVU0 708 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 CHMP5Q9NZZ3 219 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 SERPINB13Q9UIV8 391 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 TAF6LQ9Y6J9 622 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-212ENST00000558655 NEDD4P46934 1319 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 PKD1L2Q7Z442 2459 aa4.72□□□□□ -1.65
ZEB1-212ENST00000558655 POLR3DP05423 398 aaPredicted RBP4.71□□□□□ -1.65
ZEB1-212ENST00000558655 FAM163BP0C2L3 166 aa4.71□□□□□ -1.65
ZEB1-212ENST00000558655 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.651e-8■■■■■ 35.6
ZEB1-212ENST00000558655 LIFRP42702 1097 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms