RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NCOA5Q9HCD5 579 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 APEX2Q9UBZ4 518 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 AKT3Q9Y243 479 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 MRPS23Q9Y3D9 190 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 MRPL42Q9Y6G3 142 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 FAM170BA6NMN3 283 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 PPP2R2AP63151 447 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 POU4F1Q01851 419 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 RTP2Q5QGT7 225 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 ZNF765Q7L2R6 523 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 FIBCD1Q8N539 461 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 G6PC3Q9BUM1 346 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 ST7Q9NRC1 585 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 TNFRSF10DQ9UBN6 386 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 PPP1R1BQ9UD71 204 aaPredicted RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 MAPRE3Q9UPY8 281 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 ESYT3A0FGR9 886 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 NOP56O00567 594 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 SMARCA5O60264 1052 aaPredicted RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 ESR1P03372 595 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 ITGB7P26010 798 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 TEKQ02763 1124 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 NTRK3Q16288 839 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 DALRD3Q5D0E6 543 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 DCAF15Q66K64 600 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 CYP4F22Q6NT55 531 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 OSBPL1AQ9BXW6 950 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 MKRN2Q9H000 416 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 GPR27Q9NS67 375 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 MAGEC2Q9UBF1 373 aaPredicted RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 ZC3H7BQ9UGR2 993 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 PCDHB10Q9UN67 800 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 LEMD3Q9Y2U8 911 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 COBLO75128 1261 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 LRRN2O75325 713 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 CD97P48960 835 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 PCBP3P57721 371 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 EEF1DP3Q658K8 133 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 KCTD13Q8WZ19 329 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 PTPRN2Q92932 1015 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 TCTN2Q96GX1 697 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 MFSD14AQ96MC6 490 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 SP110Q9HB58 689 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 TRIM39Q9HCM9 518 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 U3KQE9 123 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 TMEM82A0PJX8 343 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 ARVCFO00192 962 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 GPR85P60893 370 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 KCNAB2Q13303 367 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 SV2CQ496J9 727 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 FOXB2Q5VYV0 432 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 ZCRB1Q8TBF4 217 aaKnown RBP2.54□□□□□ -2
HIF1A-212ENST00000557538 HRASLS5Q96KN8 279 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 KANSL2Q9H9L4 492 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 GFOD1Q9NXC2 390 aa2.54□□□□□ -2
HIF1A-212ENST00000557538 SHISA3A0PJX4 238 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 PRR33A8MZF0 331 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 GRIK1P39086 918 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 AMPD2Q01433 879 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 DOC2BQ14184 412 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 NSMFQ6X4W1 530 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 TMC3Q7Z5M5 1100 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 FRS2Q8WU20 508 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 BCL7CQ8WUZ0 217 aaPredicted RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 DDX1Q92499 740 aaKnown RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 ASIC4Q96FT7 647 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 FCRL2Q96LA5 508 aaPredicted RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 HSPA12BQ96MM6 686 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 FCRL3Q96P31 734 aaPredicted RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 ASCC2Q9H1I8 757 aaPredicted RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 HSPBP1Q9NZL4 362 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 ACSL6Q9UKU0 697 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 TPX2Q9ULW0 747 aaKnown RBP2.53□□□□□ -2
HIF1A-212ENST00000557538 ARNTLO00327 626 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 CYP26A1O43174 497 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 ASLP04424 464 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 KCNA6P17658 529 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 MASP1P48740 699 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 DHCR24Q15392 516 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 NFXL1Q6ZNB6 911 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 SLCO6A1Q86UG4 719 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 RIOX2Q8IUF8 465 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 LRRN4CLQ8ND94 238 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 MFSD3Q96ES6 412 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 MCMBPQ9BTE3 642 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 CDIP1Q9H305 208 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 FANCLQ9NW38 375 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 X6R8D5 127 aa2.53□□□□□ -2
HIF1A-212ENST00000557538 A0A087X0B3 334 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 WDR64B1ANS9 1081 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 B4E1Z4 1266 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 H7BY64 318 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 PRODHO43272 600 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 FUT4P22083 530 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 GTF2A2P52657 109 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 CHMP4BP1P59074 171 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 VSIG10LQ86VR7 867 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 PTCHD1Q96NR3 888 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 BACE2Q9Y5Z0 518 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 A0A1W2PQ45 241 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms