RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
HNRNPC-228ENST00000557033 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-228ENST00000557033 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
HNRNPC-228ENST00000557033 FOCADQ5VW36 1801 aa11.87□□□□□ -0.51
HNRNPC-228ENST00000557033 ADGRA2Q96PE1 1338 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 TRIM75PA6NK02 468 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 ASNSP08243 561 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 ATP5JP18859 108 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 USP5P45974 858 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 COPS2P61201 443 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 SPP2Q13103 211 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 GADL1Q6ZQY3 521 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 ZNF511Q8NB15 262 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 FAM161BQ96MY7 647 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 LRRCC1Q9C099 1032 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 SAP130Q9H0E3 1048 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
HNRNPC-228ENST00000557033 CDK5RAP2Q96SN8 1893 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 ADH1BP00325 375 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 IGHA2P01877 340 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 CYP2C8P10632 490 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 BCRP11274 1271 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 PSMC4P43686 418 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 EHHADHQ08426 723 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 DUSP9Q99956 384 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 PRKD2Q9BZL6 878 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 EHD4Q9H223 541 aa11.85□□□□□ -0.51
HNRNPC-228ENST00000557033 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 GOLIM4O00461 696 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 PDE6AP16499 860 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 MAPK8P45983 427 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 DAB2P98082 770 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 SLC9C1Q4G0N8 1177 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 C16orf46Q6P387 395 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 DNAJC2Q99543 621 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 HAUS7Q99871 368 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 ARHGAP39Q9C0H5 1083 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 BOLA2Q9H3K6 86 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.514e-7■■■■□ 19.3
HNRNPC-228ENST00000557033 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 PTPRFP10586 1907 aa11.84□□□□□ -0.51
HNRNPC-228ENST00000557033 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.51
HNRNPC-228ENST00000557033 TCRBV5S4A2TA0A5A2 114 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 BACH1O14867 736 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 FZD6O60353 706 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 FCGRTP55899 365 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 BACE1P56817 501 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 ALKBH2Q6NS38 261 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 SMCR8Q8TEV9 937 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 TRIM47Q96LD4 638 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 CRNKL1Q9BZJ0 848 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 PAG1Q9NWQ8 432 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
HNRNPC-228ENST00000557033 MYH1P12882 1939 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 SORBS3O60504 671 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 CTGFP29279 349 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 ADD2P35612 726 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 EIF1AXP47813 144 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 SCTRP47872 440 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 HMGCS2P54868 508 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 JAG1P78504 1218 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 GIMAP6Q6P9H5 292 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 TINF2Q9BSI4 451 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 TANGO6Q9C0B7 1094 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 TGIF2Q9GZN2 237 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 TMOD4Q9NZQ9 345 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
HNRNPC-228ENST00000557033 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 HOXA7P31268 230 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms