RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 JAK2O60674 1132 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 ECE1P42892 770 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 CUL1Q13616 776 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
SPTB-208ENST00000556626 MAPK13O15264 365 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 TERF2Q15554 542 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 NDUFA8P51970 172 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 NCAPH2Q6IBW4 605 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ANKRD35Q8N283 1001 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 C14orf93Q9H972 538 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 VTI1AQ96AJ9 217 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 GNGT2O14610 69 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 MCF2P10911 925 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 TNNI1P19237 187 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 KRT40Q6A162 431 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 DYNC1I2Q13409 638 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 CCDC92Q53HC0 331 aaPredicted RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 CEP70Q8NHQ1 597 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 MAGEF1Q9HAY2 307 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 PNMA6AP0CW24 399 aaPredicted RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 NNTQ13423 1086 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 HADHQ16836 314 aaKnown RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
SPTB-208ENST00000556626 MIS12Q9H081 205 aa11.83□□□□□ -0.52
SPTB-208ENST00000556626 RASSF7Q02833 373 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 CABP7Q86V35 215 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 KSR1Q8IVT5 923 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SH3GL3Q99963 347 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 RIOK1Q9BRS2 568 aaKnown RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 NACA2Q9H009 215 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 FANCAO15360 1455 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 FOXO3O43524 673 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 ATP5HO75947 161 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 BIRC2Q13490 618 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SEPT8Q92599 483 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 INTUQ9ULD6 942 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SGK1O00141 431 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPTB-208ENST00000556626 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 PPME1Q9Y570 386 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 MYO1CO00159 1063 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 PGRMC1O00264 195 aaKnown RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 CASP8Q14790 479 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 CAPN12Q6ZSI9 719 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 ZNF274Q96GC6 653 aaPredicted RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPTB-208ENST00000556626 MYH3P11055 1940 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 PRPF6O94906 941 aaKnown RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 CMA1P23946 247 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 C6orf118Q5T5N4 469 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 CEP19Q96LK0 163 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 SLC35F6Q8N357 371 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 FNBP4Q8N3X1 1017 aaPredicted RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 HDAC11Q96DB2 347 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 CSRNP1Q96S65 589 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 POLR3CQ9BUI4 534 aaPredicted RBP11.82□□□□□ -0.52
SPTB-208ENST00000556626 C1orf112Q9NSG2 853 aa11.82□□□□□ -0.52
SPTB-208ENST00000556626 ADCY9O60503 1353 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 KCNA4P22459 653 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 USP6NLQ92738 828 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 CHUKO15111 745 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 CASP2P42575 452 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
SPTB-208ENST00000556626 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
SPTB-208ENST00000556626 GPIHBP1Q8IV16 184 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 TRIM15Q9C019 465 aa11.81□□□□□ -0.52
SPTB-208ENST00000556626 PYCARDQ9ULZ3 195 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms