RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.13
ACTN1-221ENST00000556571 PLXNA1Q9UIW2 1896 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 GRXCR1A8MXD5 290 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 ADCY6O43306 1168 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 PBX2P40425 430 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 OAZ1P54368 228 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 NKX3-2P78367 333 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-221ENST00000556571 RAB30Q15771 203 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 PPM1EQ8WY54 764 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 MKL1Q969V6 931 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 PRDM12Q9H4Q4 367 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 FEM1BQ9UK73 627 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 SYNPO2Q9UMS6 1093 aa14.21□□□□□ -0.13
ACTN1-221ENST00000556571 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 ACRP10323 421 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-221ENST00000556571 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 FGD4Q96M96 766 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 ASB2Q96Q27 587 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 MTIF3Q9H2K0 278 aaKnown RBP14.2□□□□□ -0.14
ACTN1-221ENST00000556571 CHMP4BQ9H444 224 aaKnown RBP14.2□□□□□ -0.14
ACTN1-221ENST00000556571 IL23AQ9NPF7 189 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 THEGQ9P2T0 379 aa14.2□□□□□ -0.14
ACTN1-221ENST00000556571 IGKV6D-41A0A0C4DH26 115 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 CABYRO75952 493 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 CD4P01730 458 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 FGBP02675 491 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 FDX1P10109 184 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 COL9A1P20849 921 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 STK11IPQ8N1F8 1099 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 SEZ6LQ9BYH1 1024 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 KATNBL1Q9H079 304 aa14.19□□□□□ -0.14
ACTN1-221ENST00000556571 BDP1A6H8Y1 2624 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 CTAGE5O15320 804 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 TTLL1O95922 423 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 CYP2C18P33260 490 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 MRPS5P82675 430 aaKnown RBP14.18□□□□□ -0.14
ACTN1-221ENST00000556571 TNFAIP2Q03169 654 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 ADGRE1Q14246 886 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
ACTN1-221ENST00000556571 SLC43A3Q8NBI5 491 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 GMCL1P1Q8NEA9 526 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 LRRCC1Q9C099 1032 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 SLC28A3Q9HAS3 691 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 MTMR4Q9NYA4 1195 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
ACTN1-221ENST00000556571 ASB14A6NK59 587 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 ZEB2O60315 1214 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 BMP3P12645 472 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 GNAT2P19087 354 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 IGFBP4P22692 258 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 BEX3Q00994 111 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 CNTN2Q02246 1040 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 CXCL17Q6UXB2 119 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 FAM133AQ8N9E0 248 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 CEP95Q96GE4 821 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
ACTN1-221ENST00000556571 CXXC1Q9P0U4 656 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-221ENST00000556571 CHD9Q3L8U1 2897 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 PRDM1O75626 825 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 TDO2P48775 406 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 ITGA7Q13683 1181 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 CCDC85BQ15834 202 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-221ENST00000556571 TKFCQ3LXA3 575 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 SLFN13Q68D06 897 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 RPUSD2Q8IZ73 545 aaKnown RBP14.16□□□□□ -0.14
ACTN1-221ENST00000556571 KBTBD3Q8NAB2 608 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 CHURC1Q8WUH1 139 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 APPBP2Q92624 585 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 AP5M1Q9H0R1 490 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 NKX2-4Q9H2Z4 354 aa14.16□□□□□ -0.14
ACTN1-221ENST00000556571 GNEQ9Y223 722 aaKnown RBP14.16□□□□□ -0.14
ACTN1-221ENST00000556571 ASTN1O14525 1302 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 GREB1LQ9C091 1923 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 RNF113AO15541 343 aaKnown RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 APPP05067 770 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 STAT2P52630 851 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 IQSEC1Q6DN90 963 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 OTOP2Q7RTS6 562 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms