RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 PRR12Q9ULL5 1215 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 KCNJ14Q9UNX9 436 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 SNCAIPQ9Y6H5 919 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 IRF6O14896 467 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 SLC26A4O43511 780 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 GCFC2P16383 781 aaKnown RBP12.46□□□□□ -0.41
PABPN1-203ENST00000553960 USP11P51784 963 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 NAPAP54920 295 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 ZNF445P59923 1031 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
PABPN1-203ENST00000553960 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 NR5A1Q13285 461 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.41
PABPN1-203ENST00000553960 PPP4R3AQ6IN85 833 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.41
PABPN1-203ENST00000553960 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 CUL5Q93034 780 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 TIGD1Q96MW7 591 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 MBOAT7Q96N66 472 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.41
PABPN1-203ENST00000553960 SRPRBQ9Y5M8 271 aaKnown RBP12.46□□□□□ -0.41
PABPN1-203ENST00000553960 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 CUTAO60888 179 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 ICAM1P05362 532 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 VCAM1P19320 739 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 CYP3A7P24462 503 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 PPIL2Q13356 520 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 GNL2Q13823 731 aaKnown RBP12.45□□□□□ -0.42
PABPN1-203ENST00000553960 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 C4orf32Q8N8J7 132 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 ENGASEQ8NFI3 743 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 DDX19AQ9NUU7 478 aaKnown RBP12.45□□□□□ -0.42
PABPN1-203ENST00000553960 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
PABPN1-203ENST00000553960 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 SLC45A1Q9Y2W3 748 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 RABGAP1Q9Y3P9 1069 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 CSADQ9Y600 493 aa12.45□□□□□ -0.42
PABPN1-203ENST00000553960 ABCB11O95342 1321 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 A0A0G2JLL6 359 aaPredicted RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 FIBPO43427 364 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 CYP3A4P08684 503 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 ADCY7P51828 1080 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 SPP2Q13103 211 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 VGLL4Q14135 290 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 NONOQ15233 471 aaKnown RBP eCLIP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 PRRT2Q7Z6L0 340 aaPredicted RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 MB21D1Q8N884 522 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 GPKOWQ92917 476 aaPredicted RBP eCLIP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 HOXC10Q9NYD6 342 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 PCDHA7Q9UN72 937 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 HPSEQ9Y251 543 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
PABPN1-203ENST00000553960 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 CLIC4Q9Y696 253 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 A0A0G2JMZ2 1700 aa12.44□□□□□ -0.42
PABPN1-203ENST00000553960 UTRNP46939 3433 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 CCDC194A0A1B0GVG4 234 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 MEIS2O14770 477 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 OPLAHO14841 1288 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 CTAGE5O15320 804 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 DTNBO60941 627 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 CIITAP33076 1130 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 SEMA3FQ13275 785 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 STK38Q15208 465 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
PABPN1-203ENST00000553960 REPS2Q8NFH8 660 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 ZKSCAN4Q969J2 545 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms