RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 CNPY2Q9Y2B0 182 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 TMX2Q9Y320 296 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 COL2A1P02458 1487 aaPredicted RBP10.52□□□□□ -0.73
MARK3-207ENST00000553942 PITPNM2Q9BZ72 1349 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
MARK3-207ENST00000553942 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
MARK3-207ENST00000553942 U2AF2P26368 475 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■■■□□ 18
MARK3-207ENST00000553942 GJA5P36382 358 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
MARK3-207ENST00000553942 ZNF112Q9UJU3 913 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 WDR90Q96KV7 1748 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 SNHG28P0DPA3 235 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 HTRA3P83110 453 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 MKL1Q969V6 931 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
MARK3-207ENST00000553942 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
MARK3-207ENST00000553942 ZC3H4Q9UPT8 1303 aaKnown RBP10.51□□□□□ -0.73
MARK3-207ENST00000553942 ITGBL1O95965 494 aaPredicted RBP10.5□□□□□ -0.73
MARK3-207ENST00000553942 F13A1P00488 732 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 BMP3P12645 472 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
MARK3-207ENST00000553942 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 CPXCR1Q8N123 301 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 FBXO18Q8NFZ0 1043 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
MARK3-207ENST00000553942 MTA3Q9BTC8 594 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 SCN4AP35499 1836 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 FIBPO43427 364 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 CALM1P0DP23 149 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 CALM2P0DP24 149 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 CALM3P0DP25 149 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 VCAM1P19320 739 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 KIF5BP33176 963 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
MARK3-207ENST00000553942 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 TSC1Q92574 1164 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 TMEM260Q9NX78 707 aa10.5□□□□□ -0.73
MARK3-207ENST00000553942 BCCIPQ9P287 314 aaKnown RBP eCLIP10.5□□□□□ -0.73
MARK3-207ENST00000553942 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
MARK3-207ENST00000553942 OTOFQ9HC10 1997 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 CCDC196A0A1B0GTZ2 297 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 CLGNO14967 610 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 PRPF3O43395 683 aaKnown RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 SCG2P13521 617 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 TERF2Q15554 542 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 NPY5RQ15761 445 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 UBE2SQ16763 222 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 RBM28Q9NW13 759 aaKnown RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 DDX41Q9UJV9 622 aaKnown RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 PRR12Q9ULL5 1215 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 CSADQ9Y600 493 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 TCHHQ07283 1943 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 KIF3CO14782 793 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 DEXIO95424 95 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 BACE1P56817 501 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 RESTQ13127 1097 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 UVSSAQ2YD98 709 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 LDHDQ86WU2 507 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 DIS3L2Q8IYB7 885 aaKnown RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
MARK3-207ENST00000553942 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
MARK3-207ENST00000553942 NID2Q14112 1375 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 GADD45BO75293 160 aaPredicted RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 FLOT1O75955 427 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 CDKL5O76039 1030 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 CAPN2P17655 700 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 IREB2P48200 963 aaKnown RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 KIF23Q02241 960 aaPredicted RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 CDC37Q16543 378 aaPredicted RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 GADL1Q6ZQY3 521 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 ZIC5Q96T25 663 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 WDR33Q9C0J8 1336 aaKnown RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 MKI67P46013 3256 aaKnown RBP10.48□□□□□ -0.73
MARK3-207ENST00000553942 MYH6P13533 1939 aa10.48□□□□□ -0.73
MARK3-207ENST00000553942 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms