RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 LRRC4CQ9HCJ2 640 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 CYP26B1Q9NR63 512 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 STXBP3O00186 592 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 RFPL3O75679 317 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 SNRPB2P08579 225 aaKnown RBP7.47□□□□□ -1.21
SYNE2-210ENST00000553455 HOXC12P31275 282 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 BMP8BP34820 402 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 CLCN7P51798 805 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 SLC35F1Q5T1Q4 408 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 DENND5AQ6IQ26 1287 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
SYNE2-210ENST00000553455 KREMEN2Q8NCW0 462 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 NINJ1Q92982 152 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 SPOCK3Q9BQ16 436 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
SYNE2-210ENST00000553455 TRIT1Q9H3H1 467 aaKnown RBP7.47□□□□□ -1.21
SYNE2-210ENST00000553455 SEMA3GQ9NS98 782 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 GPATCH2Q9NW75 528 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 IFT57Q9NWB7 429 aa7.47□□□□□ -1.21
SYNE2-210ENST00000553455 BLACEA4D250 179 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 H3BS24 57 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 AURKAO14965 403 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 DYRK3O43781 588 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 CD3EP07766 207 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 IFNGR1P15260 489 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 MASP1P48740 699 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 POU4F1Q01851 419 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 SCRN1Q12765 414 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 FNDC3BQ53EP0 1204 aaKnown RBP7.46□□□□□ -1.22
SYNE2-210ENST00000553455 TM4SF20Q53R12 229 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 TRIM61Q5EBN2 209 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 THAP5Q7Z6K1 395 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 KCTD13Q8WZ19 329 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 COPS5Q92905 334 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 FCRL3Q96P31 734 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-210ENST00000553455 IPO9Q96P70 1041 aaKnown RBP7.46□□□□□ -1.22
SYNE2-210ENST00000553455 SLC12A9Q9BXP2 914 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 SPC25Q9HBM1 224 aa7.46□□□□□ -1.22
SYNE2-210ENST00000553455 DNAJC6O75061 913 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 ZNF205O95201 554 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 VAV1P15498 845 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 TPP2P29144 1249 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-210ENST00000553455 KCNJ6P48051 423 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 PTPROQ16827 1216 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 RTP2Q5QGT7 225 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 CWF19L1Q69YN2 538 aaKnown RBP7.45□□□□□ -1.22
SYNE2-210ENST00000553455 NIM1KQ8IY84 436 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 USHBP1Q8N6Y0 703 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 PIM2Q9P1W9 311 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
SYNE2-210ENST00000553455 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
SYNE2-210ENST00000553455 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-210ENST00000553455 CYP26A1O43174 497 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 KCNQ2O43526 872 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 CPP00450 1065 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 THBDP07204 575 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 FOSL1P15407 271 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 ECI1P42126 302 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
SYNE2-210ENST00000553455 TAF7LQ5H9L4 462 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 DHX37Q8IY37 1157 aaKnown RBP7.44□□□□□ -1.22
SYNE2-210ENST00000553455 LINC00116Q8NCU8 138 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 GSTCDQ8NEC7 633 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 SLC7A14Q8TBB6 771 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 NETO1Q8TDF5 533 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 UBE2FQ969M7 185 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 SLC52A2Q9HAB3 445 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 TRIM39Q9HCM9 518 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 ZSWIM5Q9P217 1185 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 BACE2Q9Y5Z0 518 aa7.44□□□□□ -1.22
SYNE2-210ENST00000553455 ARNTLO00327 626 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 SYPP08247 313 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 VIL1P09327 827 aaKnown RBP7.43□□□□□ -1.22
SYNE2-210ENST00000553455 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
SYNE2-210ENST00000553455 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-210ENST00000553455 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 FOXP3Q9BZS1 431 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 BRINP2Q9C0B6 783 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 TMX1Q9H3N1 280 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 GPRC5CQ9NQ84 441 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 SNX11Q9Y5W9 270 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 ASXL2Q76L83 1435 aa7.43□□□□□ -1.22
SYNE2-210ENST00000553455 A0A087X0B3 334 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 C2orf71A6NGG8 1288 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 MSTNO14793 375 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 SDSP20132 328 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 GABREP78334 506 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 TESK1Q15569 626 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 RCSD1Q6JBY9 416 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 BRAPQ7Z569 592 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms