RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
GCN1-208ENST00000551549 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
GCN1-208ENST00000551549 FGD4Q96M96 766 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 TMEM47Q9BQJ4 181 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 ATP11BQ9Y2G3 1177 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 ZMYM6O95789 1325 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 SYNGAP1Q96PV0 1343 aa11.5□□□□□ -0.57
GCN1-208ENST00000551549 EYSQ5T1H1 3165 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 ZNFX1Q9P2E3 1918 aaKnown RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 MYH4Q9Y623 1939 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 FDX1P10109 184 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 TOP1P11387 765 aaKnown RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 PDE4AP27815 886 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 SLC16A2P36021 539 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 TTBK2Q6IQ55 1244 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 MFSD6Q6ZSS7 791 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 DCAF4Q8WV16 495 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 UBE2OQ9C0C9 1292 aaKnown RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 RNF146Q9NTX7 359 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 TCP11L1Q9NUJ3 509 aa11.49□□□□□ -0.57
GCN1-208ENST00000551549 ZHX1Q9UKY1 873 aaPredicted RBP11.49□□□□□ -0.57
GCN1-208ENST00000551549 UNC80Q8N2C7 3258 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 ALAS1P13196 640 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 AKR1A1P14550 325 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 ACVR2BQ13705 512 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 MUM1L1Q5H9M0 696 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 RNF180Q86T96 592 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
GCN1-208ENST00000551549 DIAPH3Q9NSV4 1193 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
GCN1-208ENST00000551549 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 PHF24Q9UPV7 400 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 NEDD4P46934 1319 aa11.48□□□□□ -0.57
GCN1-208ENST00000551549 FRMPD2Q68DX3 1309 aaPredicted RBP11.48□□□□□ -0.57
GCN1-208ENST00000551549 MYADML2A6NDP7 307 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 HIP1O00291 1037 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 ZNF213O14771 459 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 ADCY6O43306 1168 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
GCN1-208ENST00000551549 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
GCN1-208ENST00000551549 SNX17Q15036 470 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 SYDE2Q5VT97 1194 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 ARMCX2Q7L311 632 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 FAM133AQ8N9E0 248 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 IL25Q9H293 177 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
GCN1-208ENST00000551549 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
GCN1-208ENST00000551549 VCANP13611 3396 aa11.47□□□□□ -0.57
GCN1-208ENST00000551549 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 ASTN1O14525 1302 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 SYNRGQ9UMZ2 1314 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 ICAM1P05362 532 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 PDHBP11177 359 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
GCN1-208ENST00000551549 TLE2Q04725 743 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 CCDC144BQ3MJ40 725 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 BTNL9Q6UXG8 535 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 TDHQ8IZJ6 230 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 ESR2Q92731 530 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 PURBQ96QR8 312 aaKnown RBP11.46□□□□□ -0.57
GCN1-208ENST00000551549 LBHD1Q9BQE6 289 aaPredicted RBP11.46□□□□□ -0.57
GCN1-208ENST00000551549 KATNBL1Q9H079 304 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 RANBP17Q9H2T7 1088 aaKnown RBP11.46□□□□□ -0.57
GCN1-208ENST00000551549 ABHD16BQ9H3Z7 469 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
GCN1-208ENST00000551549 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
GCN1-208ENST00000551549 A0A1W2PQ45 241 aaPredicted RBP11.45□□□□□ -0.58
GCN1-208ENST00000551549 A0A1W2PQY0 241 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 TRIM43BA6NCK2 446 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 DUSP11O75319 330 aaKnown RBP11.45□□□□□ -0.58
GCN1-208ENST00000551549 ACLYP53396 1101 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 KCNA10Q16322 511 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 C1orf53Q5VUE5 145 aa11.45□□□□□ -0.58
GCN1-208ENST00000551549 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms