RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 ARAP2Q8WZ64 1704 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 CHD4Q14839 1912 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 G3V3G9 751 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 ECE2O60344 883 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 IL1R1P14778 569 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 LMNB1P20700 586 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 CASP1P29466 404 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 ZSCAN26Q16670 478 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 TMTC1Q8IUR5 882 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 PNKPQ96T60 521 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 YDJCA8MPS7 323 aa12.94□□□□□ -0.34
DDB1-224ENST00000545894 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
DDB1-224ENST00000545894 FXR1P51114 621 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDB1-224ENST00000545894 GYS2P54840 703 aa12.94□□□□□ -0.34
DDB1-224ENST00000545894 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
DDB1-224ENST00000545894 SLC35F6Q8N357 371 aa12.94□□□□□ -0.34
DDB1-224ENST00000545894 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
DDB1-224ENST00000545894 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
DDB1-224ENST00000545894 LMAN1P49257 510 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 PPARAQ07869 468 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 MCM6Q14566 821 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 WHAMMP3Q1A5X7 153 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 TRERF1Q96PN7 1200 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 NAPGQ99747 312 aaPredicted RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 PDE11AQ9HCR9 933 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 MYO1AQ9UBC5 1043 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 CTAGE15A4D2H0 777 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 CTAGE8P0CG41 777 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 SEC23AQ15436 765 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 PKN1Q16512 942 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 CTAGE6Q86UF2 777 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 CTAGE4Q8IX94 777 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
DDB1-224ENST00000545894 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 CTNND2Q9UQB3 1225 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 DOCK2Q92608 1830 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 TNKSO95271 1327 aa12.93□□□□□ -0.34
DDB1-224ENST00000545894 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 N4BP3O15049 544 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 TUBBP07437 444 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 SPAG1Q07617 926 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 TRIM14Q14142 442 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 KRT31Q15323 416 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 CYP26C1Q6V0L0 522 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 ESR2Q92731 530 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 ABHD10Q9NUJ1 306 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
DDB1-224ENST00000545894 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
DDB1-224ENST00000545894 CCT6AP40227 531 aaKnown RBP12.92□□□□□ -0.34
DDB1-224ENST00000545894 ERVK-24P63145 666 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 VPS18Q9P253 973 aa12.92□□□□□ -0.34
DDB1-224ENST00000545894 RHOXF2BP0C7M4 288 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 FUT2Q10981 343 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 TTC38Q5R3I4 469 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 RHOXF2Q9BQY4 288 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 FZD9O00144 591 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 PRDM1O75626 825 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 RAD17O75943 681 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 ACTN2P35609 894 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 COPB1P53618 953 aaKnown RBP12.91□□□□□ -0.34
DDB1-224ENST00000545894 GTF2IP78347 998 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 ZNF174Q15697 407 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 NUP88Q99567 741 aaPredicted RBP12.91□□□□□ -0.34
DDB1-224ENST00000545894 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 FEZ2Q9UHY8 353 aaPredicted RBP12.91□□□□□ -0.34
DDB1-224ENST00000545894 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
DDB1-224ENST00000545894 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
DDB1-224ENST00000545894 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 WNT7AO00755 349 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 ABL1P00519 1130 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 VSNL1P62760 191 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 ATP2C1P98194 919 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms