RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 LRP10Q7Z4F1 713 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 FCRL3Q96P31 734 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-205ENST00000544506 CDADC1Q9BWV3 514 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 ADAMTS10Q9H324 1103 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
LEMD3-205ENST00000544506 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 GPR55Q9Y2T6 319 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-205ENST00000544506 STXBP3O00186 592 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 AGRPO00253 132 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 ZGLP1P0C6A0 271 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 BTN2A2Q8WVV5 523 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 SYTL4Q96C24 671 aaPredicted RBP8.04□□□□□ -1.12
LEMD3-205ENST00000544506 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 C19orf73Q9NVV2 129 aa8.04□□□□□ -1.12
LEMD3-205ENST00000544506 CDK11AQ9UQ88 783 aaPredicted RBP8.04□□□□□ -1.12
LEMD3-205ENST00000544506 A0A1W2PQU0 124 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 AURKAO14965 403 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
LEMD3-205ENST00000544506 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
LEMD3-205ENST00000544506 HK2P52789 917 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 IFRD2Q12894 506 aaPredicted RBP8.03□□□□□ -1.12
LEMD3-205ENST00000544506 GTF2IRD2BQ6EKJ0 949 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 GTF2IRD2Q86UP8 949 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 ZNF669Q96BR6 464 aaPredicted RBP8.03□□□□□ -1.12
LEMD3-205ENST00000544506 FCRL2Q96LA5 508 aaPredicted RBP8.03□□□□□ -1.12
LEMD3-205ENST00000544506 G6PC3Q9BUM1 346 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 ERVK13-1Q9NX77 482 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 PFDN2Q9UHV9 154 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 ADGRE2Q9UHX3 823 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 ZMYM5Q9UJ78 669 aa8.03□□□□□ -1.12
LEMD3-205ENST00000544506 IGSF3O75054 1194 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 PPP2R2AP63151 447 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 DUSP4Q13115 394 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 NFE2L2Q16236 605 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 CBLL1Q75N03 491 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 CCDC120Q96HB5 630 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 SGSM3Q96HU1 749 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 CTNND2Q9UQB3 1225 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 BACE2Q9Y5Z0 518 aa8.02□□□□□ -1.13
LEMD3-205ENST00000544506 IQCA1LA6NCM1 817 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 GDNFP39905 211 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
LEMD3-205ENST00000544506 LINC01599Q8WXQ3 324 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 MAP6Q96JE9 813 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 NKX2-4Q9H2Z4 354 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 PIF1Q9H611 641 aa8.01□□□□□ -1.13
LEMD3-205ENST00000544506 FGF10O15520 208 aaPredicted RBP8□□□□□ -1.13
LEMD3-205ENST00000544506 DIAPH1O60610 1272 aaKnown RBP8□□□□□ -1.13
LEMD3-205ENST00000544506 USP2O75604 605 aaPredicted RBP8□□□□□ -1.13
LEMD3-205ENST00000544506 SCRN1Q12765 414 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 RCSD1Q6JBY9 416 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 LRRC47Q8N1G4 583 aaKnown RBP8□□□□□ -1.13
LEMD3-205ENST00000544506 NAT16Q8N8M0 369 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 PDZD8Q8NEN9 1154 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 DNAJC7Q99615 494 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 ARHGEF4Q9NR80 690 aa8□□□□□ -1.13
LEMD3-205ENST00000544506 C2orf71A6NGG8 1288 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 CAPNS1P04632 268 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 GRIA2P42262 883 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 CEBPAP49715 358 aaPredicted RBP7.99□□□□□ -1.13
LEMD3-205ENST00000544506 ERVFC1P60507 584 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 CYP4F3Q08477 520 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 ANKS4BQ8N8V4 417 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 FLAD1Q8NFF5 587 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 MRFAP1L1Q96HT8 127 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 HHIPL1Q96JK4 782 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 SPATA9Q9BWV2 254 aa7.99□□□□□ -1.13
LEMD3-205ENST00000544506 HPXP02790 462 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 SNRPB2P08579 225 aaKnown RBP7.98□□□□□ -1.13
LEMD3-205ENST00000544506 SEPHS1P49903 392 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 HSP90AA2PQ14568 343 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-205ENST00000544506 SF1Q15637 639 aaKnown RBP7.98□□□□□ -1.13
LEMD3-205ENST00000544506 EEF1DP3Q658K8 133 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 CYP2R1Q6VVX0 501 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 KSR1Q8IVT5 923 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 TMEM52Q8NDY8 209 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 COPS5Q92905 334 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 PTCHD1Q96NR3 888 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 AARSD1Q9BTE6 412 aaKnown RBP7.98□□□□□ -1.13
LEMD3-205ENST00000544506 SP110Q9HB58 689 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 CYP26B1Q9NR63 512 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 KDM2BQ8NHM5 1336 aa7.98□□□□□ -1.13
LEMD3-205ENST00000544506 FADS2P1A8MWK0 482 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 ADCY3O60266 1144 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 HOXC12P31275 282 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 KIR2DL1P43626 348 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-205ENST00000544506 KIR2DL2P43627 348 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-205ENST00000544506 GFRA1P56159 465 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 CHRNEQ04844 493 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 OXR1Q8N573 874 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 TNFRSF10DQ9UBN6 386 aa7.97□□□□□ -1.13
LEMD3-205ENST00000544506 FITM1A5D6W6 292 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 SCG5P05408 212 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 THBDP07204 575 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 RAC2P15153 192 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 IRAK1P51617 712 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 PRSS53Q2L4Q9 553 aa7.96□□□□□ -1.14
LEMD3-205ENST00000544506 YOD1Q5VVQ6 348 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms