RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 IER5Q5VY09 327 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 LARP1BQ659C4 914 aaKnown RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 NPM2Q86SE8 214 aaKnown RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 WFDC8Q8IUA0 241 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM43AQ8N2R8 423 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 STAG2Q8N3U4 1231 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 BRI3BPQ8WY22 251 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CLMNQ96JQ2 1002 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 RTFDC1Q9BY42 306 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 MUC3BQ9H195 1237 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRDM5Q9NQX1 630 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SNRKQ9NRH2 765 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZMIZ1Q9ULJ6 1067 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 STARD13Q9Y3M8 1113 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 MTCH2Q9Y6C9 303 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 VPS13AQ96RL7 3174 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SPEGQ15772 3267 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CREBBPQ92793 2442 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 TAF1P21675 1872 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 PALM3A6NDB9 673 aaPredicted RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ENO4A6NNW6 628 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 SFI1A8K8P3 1242 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ARHGAP6O43182 974 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 HSP90AB1P08238 724 aaKnown RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 PHKG2P15735 406 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 CANXP27824 592 aaKnown RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 TXLNAP40222 546 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZNF280AP59817 542 aaPredicted RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 TYRO3Q06418 890 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 SFSWAPQ12872 951 aaKnown RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 LEXMQ3ZCV2 418 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 PSAPL1Q6NUJ1 521 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ELMSAN1Q6PJG2 1045 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 DPP8Q6V1X1 898 aaPredicted RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 C20orf204Q6ZNR8 217 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 FBXO11Q86XK2 927 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 DNAJC10Q8IXB1 793 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZNF295-AS1Q8N0V1 137 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 TTC9Q92623 222 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 RPGRQ92834 1020 aaKnown RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 HINFPQ9BQA5 517 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 CEP41Q9BYV8 373 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 SENP6Q9GZR1 1112 aaPredicted RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 MRPL18Q9H0U6 180 aaKnown RBP3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 SEMA4AQ9H3S1 761 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 IGFLR1Q9H665 355 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRKAG3Q9UGI9 489 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 CPA4Q9UI42 421 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 GABRQQ9UN88 632 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM50BQ9Y247 325 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZBTB1Q9Y2K1 713 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 PCDHGA11Q9Y5H2 935 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 CEP295Q9C0D2 2601 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 BRWD1Q9NSI6 2320 aa3.1□□□□□ -1.91
TRAV1-1-201ENST00000542354 UBR5O95071 2799 aaPredicted RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 NOTCH2Q04721 2471 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL4A3Q01955 1670 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 LCHNA4D1U4 455 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 GRXCR1A8MXD5 290 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 MAP3K6O95382 1288 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 LMNAP02545 664 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 CETPP11597 493 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 IL9P15248 144 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 SELPP16109 830 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 HOXA10P31260 410 aaPredicted RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCR10P46092 362 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 IREB2P48200 963 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 VCPP55072 806 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 RTP1P59025 263 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 C19orf57Q0VDD7 668 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 FOXD4L6Q3SYB3 417 aaPredicted RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 CRY2Q49AN0 593 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCDC174Q6PII3 467 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 FOXD4L3Q6VB84 417 aaPredicted RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRR23CQ6ZRP0 262 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 BTLAQ7Z6A9 289 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM35AQ86V20 835 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 ANKRD13AQ8IZ07 590 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 GIMAP7Q8NHV1 300 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 WFDC12Q8WWY7 111 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 OPTNQ96CV9 577 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 RBM17Q96I25 401 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 SUSD3Q96L08 255 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 CRAMP1Q96RY5 1269 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 SLC30A3Q99726 388 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 PHACTR1Q9C0D0 580 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 AKTIPQ9H8T0 292 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 MYOZ2Q9NPC6 264 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 DNAJB12Q9NXW2 375 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 KCNK4Q9NYG8 393 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 MUTYHQ9UIF7 546 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 ATP11BQ9Y2G3 1177 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 ATP6V0A2Q9Y487 856 aa3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 DDX60LQ5H9U9 1706 aaKnown RBP3.09□□□□□ -1.91
TRAV1-1-201ENST00000542354 FLT4P35916 1363 aa3.09□□□□□ -1.92
TRAV1-1-201ENST00000542354 KTN1Q86UP2 1357 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms