RNA–Protein interactions for RNA: ENST00000541419.1

AC079949.1-201, humanhuman

TSL 3 BASIC

Gene AC079949.1, Length 505 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079949.1-201ENST00000541419 PRPF38AQ8NAV1 312 aaKnown RBP15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 KIF1BPQ96EK5 621 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 UHRF1Q96T88 793 aaPredicted RBP15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 KATNBL1Q9H079 304 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 NKX2-4Q9H2Z4 354 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 BOLA2Q9H3K6 86 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 SPC25Q9HBM1 224 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 YBX2Q9Y2T7 364 aaKnown RBP15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 MYH7P12883 1935 aa15.46■□□□□ 0.07
AC079949.1-201ENST00000541419 CCER2I3L3R5 266 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 NDUFB10O96000 172 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 FGBP02675 491 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 ARMCX2Q7L311 632 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 NYAP2Q9P242 653 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 SLC4A4Q9Y6R1 1079 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 XIRP2A4UGR9 3374 aa15.45■□□□□ 0.06
AC079949.1-201ENST00000541419 ZBED4O75132 1171 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 ATP5JP18859 108 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 SLC43A3Q8NBI5 491 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 MYH4Q9Y623 1939 aa15.44■□□□□ 0.06
AC079949.1-201ENST00000541419 BRWD1Q9NSI6 2320 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 RASA1P20936 1047 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 PLA2G5P39877 138 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 BEX3Q00994 111 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 HAUS7Q99871 368 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 PUS7LQ9H0K6 701 aaKnown RBP15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 SLC28A3Q9HAS3 691 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 SLC38A10Q9HBR0 1119 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 ASTN1O14525 1302 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 GRIN2DO15399 1336 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 UMODL1Q5DID0 1318 aa15.43■□□□□ 0.06
AC079949.1-201ENST00000541419 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 BMP1P13497 986 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 CXCL17Q6UXB2 119 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 STK11IPQ8N1F8 1099 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 KIFC2Q96AC6 838 aa15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 NECAB3Q96P71 396 aaPredicted RBP15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 MTIF3Q9H2K0 278 aaKnown RBP15.42■□□□□ 0.06
AC079949.1-201ENST00000541419 RABGGTBP53611 331 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 CNTN2Q02246 1040 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 TNFAIP2Q03169 654 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 ITGA7Q13683 1181 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 IL27Q8NEV9 243 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 MKL1Q969V6 931 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 VWCEQ96DN2 955 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 STRBPQ96SI9 672 aaKnown RBP15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 HIPK3Q9H422 1215 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 ARPP21Q9UBL0 812 aaPredicted RBP15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 TRANK1O15050 2925 aa15.41■□□□□ 0.06
AC079949.1-201ENST00000541419 IGKV6D-41A0A0C4DH26 115 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 RAB11FIP3O75154 756 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 CABYRO75952 493 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 MYOGP15173 224 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 PTGS1P23219 599 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 OAZ1P54368 228 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 CCL23P55773 120 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 FAM122AQ96E09 287 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 NOC4LQ9BVI4 516 aaKnown RBP15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 WNT8AQ9H1J5 351 aa15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
AC079949.1-201ENST00000541419 SOWAHBA6NEL2 793 aa15.39■□□□□ 0.05
AC079949.1-201ENST00000541419 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
AC079949.1-201ENST00000541419 MINDY4BA8MYZ0 360 aa15.39■□□□□ 0.05
AC079949.1-201ENST00000541419 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
AC079949.1-201ENST00000541419 SLC4A7Q9Y6M7 1214 aa15.39■□□□□ 0.05
AC079949.1-201ENST00000541419 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 B4GALT4O60513 344 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 TFF2Q03403 129 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 PPP2R2DQ66LE6 453 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 RPUSD2Q8IZ73 545 aaKnown RBP15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 MICALL1Q8N3F8 863 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 HOMER2Q9NSB8 354 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 PCDHA11Q9Y5I1 949 aa15.38■□□□□ 0.05
AC079949.1-201ENST00000541419 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
AC079949.1-201ENST00000541419 HMMRO75330 724 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms