RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CETN3O15182 167 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 BUB1O43683 1085 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 RSRC2Q7L4I2 434 aaKnown RBP14.4□□□□□ -0.1
DNMT1-203ENST00000540357 LGALS16A8MUM7 142 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 FOXN1O15353 648 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 HEXIM1O94992 359 aaKnown RBP14.4□□□□□ -0.1
DNMT1-203ENST00000540357 CDC27P30260 824 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 E2F4Q16254 413 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 PPP2R5EQ16537 467 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 CUL5Q93034 780 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 EXOC5O00471 708 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 FMR1Q06787 632 aaKnown RBP eCLIP14.4□□□□□ -0.18e-7■■■□□ 18.6
DNMT1-203ENST00000540357 IFT88Q13099 833 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 CALCOCO2Q13137 446 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 SETDB1Q15047 1291 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 ARL6IP4Q66PJ3 421 aaKnown RBP14.4□□□□□ -0.1
DNMT1-203ENST00000540357 IRX2Q9BZI1 471 aaPredicted RBP14.4□□□□□ -0.1
DNMT1-203ENST00000540357 LY9Q9HBG7 655 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 ZNF446Q9NWS9 450 aa14.4□□□□□ -0.1
DNMT1-203ENST00000540357 FBXO2Q9UK22 296 aaPredicted RBP14.4□□□□□ -0.1
DNMT1-203ENST00000540357 HMGB1P1B2RPK0 211 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 TXKP42681 527 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 SSR1P43307 286 aaKnown RBP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 PHKA1P46020 1223 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 PEX26Q7Z412 305 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 MSANTD4Q8NCY6 345 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 IFT172Q9UG01 1749 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 CLGNO14967 610 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 PARP10Q53GL7 1025 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 FBF1Q8TES7 1133 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 EPB41L5Q9HCM4 733 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 ZRANB2O95218 330 aaKnown RBP eCLIP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 NR1D1P20393 614 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 BEND6Q5SZJ8 279 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 LIMA1Q9UHB6 759 aaKnown RBP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 NIP7Q9Y221 180 aaKnown RBP eCLIP14.39□□□□□ -0.11
DNMT1-203ENST00000540357 KCNK3O14649 394 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 TNNI2P48788 182 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 NCAPHQ15003 741 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 AK8Q96MA6 479 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
DNMT1-203ENST00000540357 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 SEL1L2Q5TEA6 688 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 LSM14BQ9BX40 385 aaKnown RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 CORO7P57737 925 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 TRIM65Q6PJ69 517 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 PI16Q6UXB8 463 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 KRT12Q99456 494 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 HINFPQ9BQA5 517 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 A0A1W2PQC6 194 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 OR52Z1P0C646 297 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 EPB41P11171 864 aaKnown RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 CCNE1P24864 410 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 RASSF7Q02833 373 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 UBE4AQ14139 1066 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 RAD9BQ6WBX8 426 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 ARPP21Q9UBL0 812 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
DNMT1-203ENST00000540357 ANKRD62A6NC57 917 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 SRGAP2O75044 1071 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 MOCS3O95396 460 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 DYMQ7RTS9 669 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 DAAM2Q86T65 1068 aa14.38□□□□□ -0.11
DNMT1-203ENST00000540357 NEDD4P46934 1319 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 ALX1Q15699 326 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 CCDC6Q16204 474 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 DENND2CQ68D51 928 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 SYCP3Q8IZU3 236 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 CALUO43852 315 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-203ENST00000540357 SEMA3FQ13275 785 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 CALCRLQ16602 461 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-203ENST00000540357 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 PARP2Q9UGN5 583 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 KRIT1O00522 736 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 AGXT2Q9BYV1 514 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 GREM2Q9H772 168 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 PIH1D3Q9NQM4 214 aaKnown RBP14.37□□□□□ -0.11
DNMT1-203ENST00000540357 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 PREX1Q8TCU6 1659 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 TNIP1Q15025 636 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-203ENST00000540357 MYOCDQ8IZQ8 938 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 ANKRD2Q9GZV1 360 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 HPCAL4Q9UM19 191 aa14.37□□□□□ -0.11
DNMT1-203ENST00000540357 GBP1P32455 592 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms