RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
DDX55-206ENST00000539934 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
DDX55-206ENST00000539934 SLC5A1P13866 664 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 GCKP35557 465 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 RUFY3Q7L099 469 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 TRIML1Q8N9V2 468 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 UHMK1Q8TAS1 419 aaKnown RBP14.16□□□□□ -0.14
DDX55-206ENST00000539934 NACC2Q96BF6 587 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
DDX55-206ENST00000539934 CDC5LQ99459 802 aaKnown RBP14.16□□□□□ -0.14
DDX55-206ENST00000539934 GBA2Q9HCG7 927 aaPredicted RBP14.16□□□□□ -0.14
DDX55-206ENST00000539934 PDRG1Q9NUG6 133 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
DDX55-206ENST00000539934 TGFB3P10600 412 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 MCAMP43121 646 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 NSUN2Q08J23 767 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX55-206ENST00000539934 LAMB3Q13751 1172 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 COL19A1Q14993 1142 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 TNIP1Q15025 636 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 VPS53Q5VIR6 699 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 PI16Q6UXB8 463 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 CLIP2Q9UDT6 1046 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 RANBP2P49792 3224 aaKnown RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 RPAP1Q9BWH6 1393 aaPredicted RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 EIF4BP23588 611 aaKnown RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 ZNF132P52740 706 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 KBTBD12Q3ZCT8 623 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 ZC3H15Q8WU90 426 aaKnown RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 CSRNP1Q96S65 589 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.15□□□□□ -0.14
DDX55-206ENST00000539934 LIMCH1Q9UPQ0 1083 aa14.15□□□□□ -0.14
DDX55-206ENST00000539934 MAST3O60307 1309 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 UQCRFS1P1P0C7P4 283 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 FGFR2P21802 821 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 PHKA1P46020 1223 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 MPP3Q13368 585 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 KRT32Q14532 448 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 WASHC4Q2M389 1173 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 CDCA2Q69YH5 1023 aaPredicted RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 B4GALNT2Q8NHY0 566 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 GIMAP1Q8WWP7 306 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 NSFL1CQ9UNZ2 370 aaKnown RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 MYO5AQ9Y4I1 1855 aaKnown RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 SMARCA1P28370 1054 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 HNRNPH1P31943 449 aaKnown RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 SF3B3Q15393 1217 aaKnown RBP14.14□□□□□ -0.15
DDX55-206ENST00000539934 ARMC9Q7Z3E5 817 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 CCDC65Q8IXS2 484 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 SP8Q8IXZ3 490 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 C2orf69Q8N8R5 385 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.14□□□□□ -0.158e-8■■■□□ 15.3
DDX55-206ENST00000539934 QPCTLQ9NXS2 382 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 RGL1Q9NZL6 768 aa14.14□□□□□ -0.15
DDX55-206ENST00000539934 LRRC10BA6NIK2 292 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 FOSL1P15407 271 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 MOB2Q70IA6 237 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 TSGA10Q9BZW7 698 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 TRIM64CA6NLI5 447 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 M0R2C6 588 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 PDLIM1O00151 329 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 CHRNDQ07001 517 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 PKP1Q13835 747 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 FAAH2Q6GMR7 532 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 ZSCAN25Q6NSZ9 544 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 C11orf96Q7Z7L8 435 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 DCPSQ96C86 337 aaKnown RBP14.13□□□□□ -0.15
DDX55-206ENST00000539934 SENP7Q9BQF6 1050 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 UBXN6Q9BZV1 441 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 PHACTR1Q9C0D0 580 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 KIF9Q9HAQ2 790 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
DDX55-206ENST00000539934 TAF6LQ9Y6J9 622 aa14.13□□□□□ -0.15
DDX55-206ENST00000539934 C6orf229H3BNL8 230 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 SNAP23O00161 211 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 BBOX1O75936 387 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 CYP21A2P08686 494 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
DDX55-206ENST00000539934 MAGEA10P43363 369 aaPredicted RBP14.12□□□□□ -0.15
DDX55-206ENST00000539934 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
DDX55-206ENST00000539934 KIAA0753Q2KHM9 967 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 PRPF38BQ5VTL8 546 aaKnown RBP14.12□□□□□ -0.15
DDX55-206ENST00000539934 PRAMEF18Q5VWM3 479 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 KIAA0825Q8IV33 1275 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms