RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NYAP2Q9P242 653 aa16.76■□□□□ 0.27
SMARCA4-206ENST00000538456 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
SMARCA4-206ENST00000538456 ARVCFO00192 962 aa16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 PSRC1Q6PGN9 363 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 FAM126BQ8IXS8 530 aa16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 ZBTB40Q9NUA8 1239 aa16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 DDX19BQ9UMR2 479 aa16.75■□□□□ 0.27
SMARCA4-206ENST00000538456 CHD7Q9P2D1 2997 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 PRDM1O75626 825 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 CYP2C18P33260 490 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 GJA9P57773 515 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 BEX3Q00994 111 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 CCDC85BQ15834 202 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 RASIP1Q5U651 963 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 CCDC144CPQ8IYA2 1237 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 SLC38A10Q9HBR0 1119 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 NCOR1O75376 2440 aa16.74■□□□□ 0.27
SMARCA4-206ENST00000538456 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 MS4A1P11836 297 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 CNTN2Q02246 1040 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 THEGQ9P2T0 379 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 LRRC37A2A6NM11 1700 aa16.73■□□□□ 0.27
SMARCA4-206ENST00000538456 IGKV6D-41A0A0C4DH26 115 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 CTAGE5O15320 804 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 COL9A1P20849 921 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 IGFBP4P22692 258 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 TDO2P48775 406 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 ADGRE1Q14246 886 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 CXCL17Q6UXB2 119 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 CHST13Q8NET6 341 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 CXXC1Q9P0U4 656 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 MSRAQ9UJ68 235 aa16.72■□□□□ 0.27
SMARCA4-206ENST00000538456 REV3LO60673 3130 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 CD4P01730 458 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 PTGS1P23219 599 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 TNFAIP2Q03169 654 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 RAB30Q15771 203 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 OSBP2Q969R2 916 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 NKX2-4Q9H2Z4 354 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 IL23AQ9NPF7 189 aa16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-206ENST00000538456 ASTN1O14525 1302 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 TTLL1O95922 423 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 APPP05067 770 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 OAZ1P54368 228 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 IKQ13123 557 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 GIMAP6Q6P9H5 292 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 OTOP2Q7RTS6 562 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 TLK2Q86UE8 772 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 HERVK_113Q902F9 699 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 ASB2Q96Q27 587 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 MTIF3Q9H2K0 278 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 ACAD9Q9H845 621 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 MTMR4Q9NYA4 1195 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
SMARCA4-206ENST00000538456 XIRP2A4UGR9 3374 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 BDP1A6H8Y1 2624 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 GPAA1O43292 621 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 FGBP02675 491 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 BMP3P12645 472 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 CCL23P55773 120 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 SLFN13Q68D06 897 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 KBTBD3Q8NAB2 608 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 APPBP2Q92624 585 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 MKL1Q969V6 931 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 AGBL1Q96MI9 1066 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 SLC28A3Q9HAS3 691 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
SMARCA4-206ENST00000538456 YBX2Q9Y2T7 364 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms