RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ZNF467Q7Z7K2 595 aaPredicted RBP20.2■□□□□ 0.82
SFSWAP-205ENST00000537164 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
SFSWAP-205ENST00000537164 ISY1Q9ULR0 285 aaKnown RBP20.2■□□□□ 0.82
SFSWAP-205ENST00000537164 SEPT4O43236 478 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 ICAM1P05362 532 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 GPATCH4Q5T3I0 446 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 SYDE2Q5VT97 1194 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 PNMA1Q8ND90 353 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 CHMP4CQ96CF2 233 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 ACAD9Q9H845 621 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 MTMR7Q9Y216 660 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 TNKSO95271 1327 aa20.19■□□□□ 0.82
SFSWAP-205ENST00000537164 COL6A1P12109 1028 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 SEC23AQ15436 765 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 ESYT1Q9BSJ8 1104 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 SYNGAP1Q96PV0 1343 aa20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 RANBP2P49792 3224 aaKnown RBP20.18■□□□□ 0.82
SFSWAP-205ENST00000537164 CNGA1P29973 690 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 SLC16A2P36021 539 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 TRDNQ13061 729 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 FGD4Q96M96 766 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 RNF146Q9NTX7 359 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 FRMPD2Q68DX3 1309 aaPredicted RBP20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 MCM3APO60318 1980 aa20.17■□□□□ 0.82
SFSWAP-205ENST00000537164 LCTP09848 1927 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 E7EWF7 191 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 SLC4A3P48751 1232 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 FAM133AQ8N9E0 248 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 A1CFQ9NQ94 594 aaKnown RBP20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 HOMER2Q9NSB8 354 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 RBM8AQ9Y5S9 174 aaKnown RBP20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 TAF6LQ9Y6J9 622 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 PFASO15067 1338 aa20.16■□□□□ 0.82
SFSWAP-205ENST00000537164 ZNF865P0CJ78 1059 aaPredicted RBP20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 ALAS1P13196 640 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 SNAP25P60880 206 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 CCDC174Q6PII3 467 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 DPF3Q92784 378 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 C11orf49Q9H6J7 331 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 CCPG1Q9ULG6 757 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 WDR19Q8NEZ3 1342 aa20.15■□□□□ 0.82
SFSWAP-205ENST00000537164 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 ASPRV1Q53RT3 343 aa20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 IFIT1BQ5T764 474 aaKnown RBP20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 KIAA1211Q6ZU35 1233 aa20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 STOX1Q6ZVD7 989 aa20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 NCOA7Q8NI08 942 aa20.14■□□□□ 0.81
SFSWAP-205ENST00000537164 DNM1LO00429 736 aa20.13■□□□□ 0.81
SFSWAP-205ENST00000537164 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
SFSWAP-205ENST00000537164 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
SFSWAP-205ENST00000537164 CNPY2Q9Y2B0 182 aa20.13■□□□□ 0.81
SFSWAP-205ENST00000537164 MYH6P13533 1939 aa20.13■□□□□ 0.81
SFSWAP-205ENST00000537164 H0YGN5 161 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 POTEB2H3BUK9 544 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 GOLGA8HP0CJ92 632 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 CNTN2Q02246 1040 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 NECTIN1Q15223 517 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 RALYLQ86SE5 291 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 MB21D2Q8IYB1 491 aaPredicted RBP20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 ARRDC4Q8NCT1 418 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 ABHD16BQ9H3Z7 469 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 NR2E3Q9Y5X4 410 aa20.12■□□□□ 0.81
SFSWAP-205ENST00000537164 LRRC37A2A6NM11 1700 aa20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 EVI5O60447 810 aa20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 PARP1P09874 1014 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 AKR1A1P14550 325 aa20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 MAF1Q9H063 256 aa20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.11■□□□□ 0.81
SFSWAP-205ENST00000537164 ASTN1O14525 1302 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 SOWAHBA6NEL2 793 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 NEFLP07196 543 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 ANTXR2P58335 489 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 ARMCX2Q7L311 632 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 CCDC144CPQ8IYA2 1237 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 ADGRF4Q8IZF3 695 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 CLEC4DQ8WXI8 215 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 UBA5Q9GZZ9 404 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 KATNBL1Q9H079 304 aa20.1■□□□□ 0.81
SFSWAP-205ENST00000537164 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 ASB14A6NK59 587 aa20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 IFIT3O14879 490 aaKnown RBP20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 SLC27A2O14975 620 aa20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 RARBP10826 455 aa20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 ACVR2BQ13705 512 aa20.09■□□□□ 0.81
SFSWAP-205ENST00000537164 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 297.9 ms