RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CATIPQ7Z7H3 387 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 TRIB2Q92519 343 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 ARMC5Q96C12 935 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 JMJD4Q9H9V9 463 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 CWC22Q9HCG8 908 aaKnown RBP20.88■□□□□ 0.93
DDX55-204ENST00000536079 VAT1LQ9HCJ6 419 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 HOMER2Q9NSB8 354 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 FLRT1Q9NZU1 646 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 KLRF2D3W0D1 207 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 FDX1P10109 184 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 RPS6KB1P23443 525 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 SLC9C1Q4G0N8 1177 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 MUM1L1Q5H9M0 696 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 Q6ZUG5 572 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 CCDC144CPQ8IYA2 1237 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 SOCS4Q8WXH5 440 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
DDX55-204ENST00000536079 CCDC69A6NI79 296 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 CCDC85CA6NKD9 419 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 CYTH3O43739 400 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 PGK2P07205 417 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 MMP19Q99542 508 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 ZSWIM6Q9HCJ5 1215 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
DDX55-204ENST00000536079 STRNO43815 780 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 DDAH1O94760 285 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 ICAM1P05362 532 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 HMGB1P09429 215 aaKnown RBP20.85■□□□□ 0.93
DDX55-204ENST00000536079 ALAS1P13196 640 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 RGS2P41220 211 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 MTFR1Q15390 333 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 CDC37Q16543 378 aaPredicted RBP20.85■□□□□ 0.93
DDX55-204ENST00000536079 TMTC2Q8N394 836 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 SLAIN1Q8ND83 568 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 PXYLP1Q8TE99 480 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
DDX55-204ENST00000536079 RNF146Q9NTX7 359 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 SMCHD1A6NHR9 2005 aa20.85■□□□□ 0.93
DDX55-204ENST00000536079 PPP1R11O60927 126 aaPredicted RBP20.84■□□□□ 0.93
DDX55-204ENST00000536079 CAPN15O75808 1086 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 IGHA2P01877 340 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 INHAP05111 366 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 HOXC6P09630 235 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 FCER1AP12319 257 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
DDX55-204ENST00000536079 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 RUFY3Q7L099 469 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 ABRAQ8N0Z2 381 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 CMTR1Q8N1G2 835 aaKnown RBP20.84■□□□□ 0.93
DDX55-204ENST00000536079 CLEC4DQ8WXI8 215 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 MTMR8Q96EF0 704 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 TRERF1Q96PN7 1200 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 APBA2Q99767 749 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 SLC12A7Q9Y666 1083 aa20.84■□□□□ 0.93
DDX55-204ENST00000536079 PSMA5P28066 241 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 COPB2P35606 906 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 APOA5Q6Q788 366 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.83■□□□□ 0.93
DDX55-204ENST00000536079 SRBD1Q8N5C6 995 aaKnown RBP20.83■□□□□ 0.93
DDX55-204ENST00000536079 CHST13Q8NET6 341 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 BRF1Q92994 677 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 LARP6Q9BRS8 491 aaKnown RBP20.83■□□□□ 0.93
DDX55-204ENST00000536079 RIOX1Q9H6W3 641 aa20.83■□□□□ 0.93
DDX55-204ENST00000536079 DNAJC25-GNG10A0A024R161 153 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 KLF18A0A0U1RQI7 1052 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 DHX16O60231 1041 aaKnown RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 ZNF792Q3KQV3 632 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 USH1GQ495M9 461 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 DPP9Q86TI2 863 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 MICU3Q86XE3 530 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 FGD4Q96M96 766 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 PURBQ96QR8 312 aaKnown RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 PIGSQ96S52 555 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 AGXT2Q9BYV1 514 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
DDX55-204ENST00000536079 A1CFQ9NQ94 594 aaKnown RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 FAM217BQ9NTX9 383 aaPredicted RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 BIN2Q9UBW5 565 aaPredicted RBP20.82■□□□□ 0.92
DDX55-204ENST00000536079 ZNF236Q9UL36 1845 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 NFIBO00712 420 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 KCTD2Q14681 263 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 TKFCQ3LXA3 575 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 FANCBQ8NB91 859 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 PIBF1Q8WXW3 757 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 IL17RAQ96F46 866 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 UNC93B1Q9H1C4 597 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 ACAD9Q9H845 621 aa20.81■□□□□ 0.92
DDX55-204ENST00000536079 POTEFA5A3E0 1075 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 HMGCRP04035 888 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 CYP2C19P33261 490 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 SOX10P56693 466 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 CNTN2Q02246 1040 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 FBXL16Q8N461 479 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms