RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.08
COPB1-209ENST00000533096 DDX49Q9Y6V7 483 aaKnown RBP15.58■□□□□ 0.08
COPB1-209ENST00000533096 CDK5RAP2Q96SN8 1893 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
COPB1-209ENST00000533096 GSG1L2A8MUP6 293 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 MS4A1P11836 297 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 PTGS1P23219 599 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 RABGGTBP53611 331 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 MRPS5P82675 430 aaKnown RBP15.57■□□□□ 0.08
COPB1-209ENST00000533096 IKQ13123 557 aaPredicted RBP15.57■□□□□ 0.08
COPB1-209ENST00000533096 ZNF467Q7Z7K2 595 aaPredicted RBP15.57■□□□□ 0.08
COPB1-209ENST00000533096 FAM126BQ8IXS8 530 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
COPB1-209ENST00000533096 ADAMTS19Q8TE59 1207 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 AP5M1Q9H0R1 490 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 IL23AQ9NPF7 189 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 FEM1BQ9UK73 627 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 FOCADQ5VW36 1801 aa15.57■□□□□ 0.08
COPB1-209ENST00000533096 TMEM232C9JQI7 657 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 TDO2P48775 406 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 SNAP25P60880 206 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 RAB30Q15771 203 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 PSRC1Q6PGN9 363 aaPredicted RBP15.56■□□□□ 0.08
COPB1-209ENST00000533096 EEPD1Q7L9B9 569 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 CHST13Q8NET6 341 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 AGBL1Q96MI9 1066 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 TRPV6Q9H1D0 765 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 HIPK3Q9H422 1215 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 SLC38A10Q9HBR0 1119 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 THEGQ9P2T0 379 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 FBXO40Q9UH90 709 aa15.56■□□□□ 0.08
COPB1-209ENST00000533096 RLFQ13129 1914 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 UMODL1Q5DID0 1318 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 ATP2A1O14983 1001 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 MYOGP15173 224 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 CST5P28325 142 aaPredicted RBP15.55■□□□□ 0.08
COPB1-209ENST00000533096 PSMC6P62333 389 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 ITGA7Q13683 1181 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 SKIV2LQ15477 1246 aaKnown RBP15.55■□□□□ 0.08
COPB1-209ENST00000533096 SBK1Q52WX2 424 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 AKNAD1Q5T1N1 836 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 HERVK_113Q902F9 699 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 CEP95Q96GE4 821 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 FGD4Q96M96 766 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 UPF3AQ9H1J1 476 aaKnown RBP15.55■□□□□ 0.08
COPB1-209ENST00000533096 MTIF3Q9H2K0 278 aaKnown RBP15.55■□□□□ 0.08
COPB1-209ENST00000533096 PDGFCQ9NRA1 345 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
COPB1-209ENST00000533096 YBX2Q9Y2T7 364 aaKnown RBP15.55■□□□□ 0.08
COPB1-209ENST00000533096 LTBP2Q14767 1821 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 CTAGE5O15320 804 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 CD4P01730 458 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 BMP3P12645 472 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 ALAS1P13196 640 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 TMEM63BQ5T3F8 832 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 OSBP2Q969R2 916 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 UHRF1Q96T88 793 aaPredicted RBP15.54■□□□□ 0.08
COPB1-209ENST00000533096 LRRCC1Q9C099 1032 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 MTMR4Q9NYA4 1195 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
COPB1-209ENST00000533096 FRMPD3Q5JV73 1810 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 TTLL1O95922 423 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 TSPY3P0CV98 308 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 TSPY8P0CW00 308 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 SMPD1P17405 629 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 MCCP23508 829 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 TFAP4Q01664 338 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 FSCN1Q16658 493 aaKnown RBP15.53■□□□□ 0.08
COPB1-209ENST00000533096 TSHZ3Q63HK5 1081 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 MKL1Q969V6 931 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 SCLYQ96I15 445 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 NECAB3Q96P71 396 aaPredicted RBP15.53■□□□□ 0.08
COPB1-209ENST00000533096 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
COPB1-209ENST00000533096 ACAD9Q9H845 621 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 ECHDC1Q9NTX5 307 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 RNF146Q9NTX7 359 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 SLC4A7Q9Y6M7 1214 aa15.53■□□□□ 0.08
COPB1-209ENST00000533096 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 ROBO3Q96MS0 1386 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 ASTN1O14525 1302 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.08
COPB1-209ENST00000533096 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 RFXAPO00287 272 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 RNF113AO15541 343 aaKnown RBP15.52■□□□□ 0.08
COPB1-209ENST00000533096 ZEB2O60315 1214 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 TLK2Q86UE8 772 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
COPB1-209ENST00000533096 CHURC1Q8WUH1 139 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 PURBQ96QR8 312 aaKnown RBP15.52■□□□□ 0.08
COPB1-209ENST00000533096 KATNBL1Q9H079 304 aa15.52■□□□□ 0.08
COPB1-209ENST00000533096 CERS4Q9HA82 394 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms