RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 TTLL1O95922 423 aa17.13■□□□□ 0.33
USP35-204ENST00000530267 RPN1P04843 607 aaKnown RBP17.13■□□□□ 0.33
USP35-204ENST00000530267 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
USP35-204ENST00000530267 SPECC1LQ69YQ0 1117 aa17.13■□□□□ 0.33
USP35-204ENST00000530267 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
USP35-204ENST00000530267 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
USP35-204ENST00000530267 FOCADQ5VW36 1801 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
USP35-204ENST00000530267 TECP42680 631 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 KRT25Q7Z3Z0 450 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
USP35-204ENST00000530267 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
USP35-204ENST00000530267 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
USP35-204ENST00000530267 NOVP48745 357 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 LRRC15Q8TF66 581 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 MYH8P13535 1937 aa17.12■□□□□ 0.33
USP35-204ENST00000530267 H0YIN7 160 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 DHX8Q14562 1220 aaKnown RBP17.11■□□□□ 0.33
USP35-204ENST00000530267 NAA30Q147X3 362 aaPredicted RBP17.11■□□□□ 0.33
USP35-204ENST00000530267 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 ECE2O60344 883 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 NR1I3Q14994 352 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
USP35-204ENST00000530267 PYM1Q9BRP8 204 aaKnown RBP17.11■□□□□ 0.33
USP35-204ENST00000530267 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
USP35-204ENST00000530267 TXKP42681 527 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 AOC3Q16853 763 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
USP35-204ENST00000530267 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 A0A1B0GTH6 734 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 PLCG1P19174 1290 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 PRCPP42785 496 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 TBX2Q13207 712 aaPredicted RBP17.1■□□□□ 0.33
USP35-204ENST00000530267 UBE2SQ16763 222 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
USP35-204ENST00000530267 SYT10Q6XYQ8 523 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 CABP7Q86V35 215 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 DNAJC18Q9H819 358 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
USP35-204ENST00000530267 ADCY7P51828 1080 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 PAK1Q13153 545 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
USP35-204ENST00000530267 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
USP35-204ENST00000530267 TMX1Q9H3N1 280 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 USP17L10C9JJH3 530 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 PPP1R11O60927 126 aaPredicted RBP17.09■□□□□ 0.33
USP35-204ENST00000530267 TNNI2P48788 182 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 TMEM139Q8IV31 216 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
USP35-204ENST00000530267 NRXN2Q9P2S2 1712 aa17.09■□□□□ 0.33
USP35-204ENST00000530267 TDP2O95551 362 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 SNHG28P0DPA3 235 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.33
USP35-204ENST00000530267 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 KIF18AQ8NI77 898 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 EEF2KMTQ96G04 330 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 VPS16Q9H269 839 aa17.08■□□□□ 0.33
USP35-204ENST00000530267 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.33
USP35-204ENST00000530267 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.08■□□□□ 0.33
USP35-204ENST00000530267 V9GYY5 206 aaPredicted RBP17.08■□□□□ 0.33
USP35-204ENST00000530267 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
USP35-204ENST00000530267 LAD1O00515 517 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 PRPHP41219 470 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 KCND1Q9NSA2 647 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 RMND1Q9NWS8 449 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 SLX4Q8IY92 1834 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
USP35-204ENST00000530267 CTIFO43310 598 aaKnown RBP17.07■□□□□ 0.32
USP35-204ENST00000530267 SLC37A4O43826 429 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 IGSF22Q8N9C0 903 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 GJA10Q969M2 543 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 FAM198AQ9UFP1 575 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 RBL2Q08999 1139 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 KRT31Q15323 416 aa17.07■□□□□ 0.32
USP35-204ENST00000530267 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
USP35-204ENST00000530267 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms