RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 RXRAP19793 462 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 CBX1P83916 185 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 AKAP17AQ02040 695 aaKnown RBP16.66■□□□□ 0.26
NR1H3-231ENST00000529540 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 WASF1Q92558 559 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
NR1H3-231ENST00000529540 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 CFAP45Q9UL16 551 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 PLA2G6O60733 806 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 LRMPQ12912 555 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 MTMR2Q13614 643 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 IQCB1Q15051 598 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 CST9Q5W186 159 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 SPZ1Q9BXG8 430 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 KIF20AO95235 890 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 TNNT1P13805 278 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 CDC27P30260 824 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 ADD1P35611 737 aaKnown RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 MOB2Q70IA6 237 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-231ENST00000529540 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
NR1H3-231ENST00000529540 STAT2P52630 851 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 HUNKP57058 714 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 NTRK3Q16288 839 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 STX1AQ16623 288 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 RAB11FIP4Q86YS3 637 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 CACTINQ8WUQ7 758 aaKnown RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 HHIPL1Q96JK4 782 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
NR1H3-231ENST00000529540 NRBP1Q9UHY1 535 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
NR1H3-231ENST00000529540 PTPDC1A2A3K4 754 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 JAK2O60674 1132 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 SNAPC2Q13487 334 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
NR1H3-231ENST00000529540 RGS22Q8NE09 1264 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 FEM1BQ9UK73 627 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
NR1H3-231ENST00000529540 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 IRF6O14896 467 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 DEXIO95424 95 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 FDX1P10109 184 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 TRAF1Q13077 416 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 BTNL9Q6UXG8 535 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 SAPCD2Q86UD0 394 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 FAM177A1Q8N128 213 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 PHIPQ8WWQ0 1821 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 H3BQV1 296 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 XBP1P17861 261 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 VCAM1P19320 739 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 GTF2A2P52657 109 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 HMGCS2P54868 508 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 IKQ13123 557 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms