RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 DEFB118Q96PH6 123 aa20.35■□□□□ 0.85
USP35-202ENST00000528910 KAT14Q9H8E8 782 aa20.35■□□□□ 0.85
USP35-202ENST00000528910 ANO2Q9NQ90 1003 aa20.35■□□□□ 0.85
USP35-202ENST00000528910 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
USP35-202ENST00000528910 DIS3Q9Y2L1 958 aaKnown RBP20.35■□□□□ 0.85
USP35-202ENST00000528910 NECTIN1Q15223 517 aa20.34■□□□□ 0.85
USP35-202ENST00000528910 TKFCQ3LXA3 575 aa20.34■□□□□ 0.85
USP35-202ENST00000528910 UBE2Q1Q7Z7E8 422 aa20.34■□□□□ 0.85
USP35-202ENST00000528910 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
USP35-202ENST00000528910 MAML3Q96JK9 1138 aa20.34■□□□□ 0.85
USP35-202ENST00000528910 DNAJC25-GNG10A0A024R161 153 aa20.33■□□□□ 0.85
USP35-202ENST00000528910 CYBAP13498 195 aa20.33■□□□□ 0.85
USP35-202ENST00000528910 SLC16A2P36021 539 aa20.33■□□□□ 0.85
USP35-202ENST00000528910 ZNF792Q3KQV3 632 aa20.33■□□□□ 0.85
USP35-202ENST00000528910 IFIT1BQ5T764 474 aaKnown RBP20.33■□□□□ 0.85
USP35-202ENST00000528910 GPCPD1Q9NPB8 672 aa20.33■□□□□ 0.85
USP35-202ENST00000528910 MKI67P46013 3256 aaKnown RBP20.33■□□□□ 0.85
USP35-202ENST00000528910 ALPK3Q96L96 1907 aa20.33■□□□□ 0.84
USP35-202ENST00000528910 SLC27A2O14975 620 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 ICAM1P05362 532 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 PGK2P07205 417 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 CCND3P30281 292 aaPredicted RBP20.32■□□□□ 0.84
USP35-202ENST00000528910 ANTXR2P58335 489 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 ASPRV1Q53RT3 343 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 CREB3L3Q68CJ9 461 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 AGBL1Q96MI9 1066 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 ACAD9Q9H845 621 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 RNF146Q9NTX7 359 aa20.32■□□□□ 0.84
USP35-202ENST00000528910 WDR19Q8NEZ3 1342 aa20.31■□□□□ 0.84
USP35-202ENST00000528910 CYP2C19P33261 490 aa20.31■□□□□ 0.84
USP35-202ENST00000528910 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
USP35-202ENST00000528910 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
USP35-202ENST00000528910 FARP2O94887 1054 aaPredicted RBP20.3■□□□□ 0.84
USP35-202ENST00000528910 SNAP25P60880 206 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
USP35-202ENST00000528910 ANKLE1Q8NAG6 615 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 TRPV1Q8NER1 839 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 HOMER2Q9NSB8 354 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 PNMA2Q9UL42 364 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 OGDHLQ9ULD0 1010 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 CCPG1Q9ULG6 757 aa20.3■□□□□ 0.84
USP35-202ENST00000528910 IFIT3O14879 490 aaKnown RBP20.29■□□□□ 0.84
USP35-202ENST00000528910 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
USP35-202ENST00000528910 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
USP35-202ENST00000528910 ZNF467Q7Z7K2 595 aaPredicted RBP20.29■□□□□ 0.84
USP35-202ENST00000528910 FGD4Q96M96 766 aa20.29■□□□□ 0.84
USP35-202ENST00000528910 A1CFQ9NQ94 594 aaKnown RBP20.29■□□□□ 0.84
USP35-202ENST00000528910 NRBP1Q9UHY1 535 aa20.29■□□□□ 0.84
USP35-202ENST00000528910 PFASO15067 1338 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 ERICH2A1L162 156 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 MSCO60682 206 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
USP35-202ENST00000528910 ALAS1P13196 640 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 SLC4A3P48751 1232 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 WTAPQ15007 396 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 RNF20Q5VTR2 975 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 LHX8Q68G74 356 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 ANKRD35Q8N283 1001 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 TRERF1Q96PN7 1200 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 TINF2Q9BSI4 451 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 SENP2Q9HC62 589 aa20.28■□□□□ 0.84
USP35-202ENST00000528910 SYNGAP1Q96PV0 1343 aa20.27■□□□□ 0.84
USP35-202ENST00000528910 TFRCP02786 760 aaKnown RBP20.27■□□□□ 0.84
USP35-202ENST00000528910 TAL1P17542 331 aaPredicted RBP20.27■□□□□ 0.84
USP35-202ENST00000528910 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
USP35-202ENST00000528910 MAMDC4Q6UXC1 1216 aa20.27■□□□□ 0.84
USP35-202ENST00000528910 FAM133AQ8N9E0 248 aa20.27■□□□□ 0.84
USP35-202ENST00000528910 IGDCC4Q8TDY8 1250 aa20.27■□□□□ 0.84
USP35-202ENST00000528910 DDX20Q9UHI6 824 aaKnown RBP20.27■□□□□ 0.84
USP35-202ENST00000528910 MCM5P33992 734 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
USP35-202ENST00000528910 COL9A3Q14050 684 aaPredicted RBP20.26■□□□□ 0.83
USP35-202ENST00000528910 GRM4Q14833 912 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
USP35-202ENST00000528910 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
USP35-202ENST00000528910 SEPT4O43236 478 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 PRC1O43663 620 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 TROAPQ12815 778 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 CDC37Q16543 378 aaPredicted RBP20.25■□□□□ 0.83
USP35-202ENST00000528910 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 UBA5Q9GZZ9 404 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 CYP39A1Q9NYL5 469 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 MAD2L2Q9UI95 211 aa20.25■□□□□ 0.83
USP35-202ENST00000528910 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
USP35-202ENST00000528910 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
USP35-202ENST00000528910 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
USP35-202ENST00000528910 CLEC4DQ8WXI8 215 aa20.24■□□□□ 0.83
USP35-202ENST00000528910 KCNB2Q92953 911 aa20.24■□□□□ 0.83
USP35-202ENST00000528910 MTMR8Q96EF0 704 aa20.24■□□□□ 0.83
USP35-202ENST00000528910 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
USP35-202ENST00000528910 POTEB2H3BUK9 544 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 NFIBO00712 420 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 DDAH1O94760 285 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 DIS3LQ8TF46 1054 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms