RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 PGBD3Q8N328 593 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 LINS1Q8NG48 757 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 DNAAF4Q8WXU2 420 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 ACDQ96AP0 544 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 XAGE2Q96GT9 111 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 SENP6Q9GZR1 1112 aaPredicted RBP6.82□□□□□ -1.32
CHKA-204ENST00000528235 AGTPBP1Q9UPW5 1226 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 AFG3L2Q9Y4W6 797 aa6.82□□□□□ -1.32
CHKA-204ENST00000528235 SMCHD1A6NHR9 2005 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 COL6A1P12109 1028 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 SMAD3P84022 425 aaKnown RBP6.81□□□□□ -1.32
CHKA-204ENST00000528235 FOXO4P98177 505 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 FKBP5Q13451 457 aaPredicted RBP6.81□□□□□ -1.32
CHKA-204ENST00000528235 SHHQ15465 462 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 SLFNL1Q499Z3 407 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 G2E3Q7L622 706 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 ZSCAN29Q8IWY8 852 aaPredicted RBP6.81□□□□□ -1.32
CHKA-204ENST00000528235 TRIB2Q92519 343 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 TTYH1Q9H313 450 aaPredicted RBP6.81□□□□□ -1.32
CHKA-204ENST00000528235 GPAMQ9HCL2 828 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 GJD2Q9UKL4 321 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 DOLKQ9UPQ8 538 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 SUGT1Q9Y2Z0 365 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 BDP1A6H8Y1 2624 aa6.81□□□□□ -1.32
CHKA-204ENST00000528235 MROH5Q6ZUA9 1318 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 CNTNAP5Q8WYK1 1306 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 CTNND1O60716 968 aaKnown RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 CLSTN1O94985 981 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 ZKSCAN1P17029 563 aaPredicted RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 PHKA2P46019 1235 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 CACNB2Q08289 660 aaPredicted RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 PDE3AQ14432 1141 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 CDC42EP5Q6NZY7 148 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 FBXO33Q7Z6M2 555 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 TSPYL6Q8N831 410 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 OXCT2Q9BYC2 517 aaPredicted RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 ZMYND15Q9H091 742 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 CWC22Q9HCG8 908 aaKnown RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 PRDM5Q9NQX1 630 aaPredicted RBP6.8□□□□□ -1.32
CHKA-204ENST00000528235 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 ATP11BQ9Y2G3 1177 aa6.8□□□□□ -1.32
CHKA-204ENST00000528235 OIP5O43482 229 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 CNGA1P29973 690 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 CCND3P30281 292 aaPredicted RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 NFIAQ12857 509 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 FLIIQ13045 1269 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 RALBP1Q15311 655 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 C9orf50Q5SZB4 431 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 TREML2Q5T2D2 321 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 MAP3K21Q5TCX8 1036 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 WDR66Q8TBY9 1149 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 ATXN2LQ8WWM7 1075 aaKnown RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 SOCS4Q8WXH5 440 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 UHRF1Q96T88 793 aaPredicted RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 C1QTNF1Q9BXJ1 281 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 PUS3Q9BZE2 481 aaKnown RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 C9orf78Q9NZ63 289 aaPredicted RBP6.79□□□□□ -1.32
CHKA-204ENST00000528235 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
CHKA-204ENST00000528235 RGS2P41220 211 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 RGS3P49796 1198 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 RTP1P59025 263 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 IRX3P78415 501 aaPredicted RBP6.78□□□□□ -1.32
CHKA-204ENST00000528235 SPP2Q13103 211 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 TWISTNBQ3B726 338 aaPredicted RBP6.78□□□□□ -1.32
CHKA-204ENST00000528235 METTL24Q5JXM2 366 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 USP38Q8NB14 1042 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 RHBDD1Q8TEB9 315 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 BADQ92934 168 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 ASCC2Q9H1I8 757 aaPredicted RBP6.78□□□□□ -1.32
CHKA-204ENST00000528235 THEGQ9P2T0 379 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 GDF2Q9UK05 429 aaPredicted RBP6.78□□□□□ -1.32
CHKA-204ENST00000528235 CDH23Q9H251 3354 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
CHKA-204ENST00000528235 APAF1O14727 1248 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 MSTNO14793 375 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 MSCO60682 206 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 ENTPD3O75355 529 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 LDHBP07195 334 aaKnown RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 IFIT1P09914 478 aaKnown RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 MAPK4P31152 587 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 HMGCS2P54868 508 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 GRIN2CQ14957 1233 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 C4orf17Q53FE4 359 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 EPHA10Q5JZY3 1008 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 MFSD14CQ5VZR4 134 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 CCDC84Q86UT8 332 aaPredicted RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 ZFPM1Q8IX07 1006 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 PHTF2Q8N3S3 785 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 ZNF280CQ8ND82 737 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 GPRC5AQ8NFJ5 357 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms