RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 TNRC18O15417 2968 aaPredicted RBP12.92□□□□□ -0.34
CCDC84-205ENST00000528088 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 LPAR1Q92633 364 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 ASCC2Q9H1I8 757 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-205ENST00000528088 RPAP3Q9H6T3 665 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-205ENST00000528088 SCUBE2Q9NQ36 999 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 MYPNQ86TC9 1320 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 PDE4DIPQ5VU43 2346 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 BRCA2P51587 3418 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
CCDC84-205ENST00000528088 GNRH1P01148 92 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 FCGRTP55899 365 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-205ENST00000528088 KRT32Q14532 448 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 MTFR1Q15390 333 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 SIAH1Q8IUQ4 282 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 C12orf42Q96LP6 360 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-205ENST00000528088 KAT14Q9H8E8 782 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
CCDC84-205ENST00000528088 TNKSO95271 1327 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 F5H6K3 240 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CCDC84-205ENST00000528088 LILRB3O75022 631 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 NDUFB10O96000 172 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 TOP1P11387 765 aaKnown RBP12.9□□□□□ -0.34
CCDC84-205ENST00000528088 FGD1P98174 961 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 KLRC3Q07444 240 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
CCDC84-205ENST00000528088 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 P2RX7Q99572 595 aaKnown RBP12.9□□□□□ -0.34
CCDC84-205ENST00000528088 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
CCDC84-205ENST00000528088 PRC1O43663 620 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 FLOT1O75955 427 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 HOXD10P28358 340 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 MCM5P33992 734 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 HSPA4P34932 840 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 PRMT2P55345 433 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
CCDC84-205ENST00000528088 TTC14Q96N46 770 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-205ENST00000528088 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
CCDC84-205ENST00000528088 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-205ENST00000528088 GRK4P32298 578 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 SLC1A4P43007 532 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 FLT3LGP49771 235 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 WTAPQ15007 396 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 FAM110CQ1W6H9 321 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
CCDC84-205ENST00000528088 MKL1Q969V6 931 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
CCDC84-205ENST00000528088 MKI67P46013 3256 aaKnown RBP12.88□□□□□ -0.35
CCDC84-205ENST00000528088 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 BMP3P12645 472 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 HOXB1P14653 301 aaPredicted RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 HERVK_113P62684 666 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 CATSPERGQ6ZRH7 1159 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 CCAR1Q8IX12 1150 aaKnown RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 PNMA1Q8ND90 353 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
CCDC84-205ENST00000528088 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
CCDC84-205ENST00000528088 SNX14Q9Y5W7 946 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms