RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
NKX3-1-202ENST00000523261 ASTN1O14525 1302 aa16.87■□□□□ 0.29
NKX3-1-202ENST00000523261 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
NKX3-1-202ENST00000523261 ST18O60284 1047 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 ICA1Q05084 483 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 HERC6Q8IVU3 1022 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 ZNF512BQ96KM6 892 aaPredicted RBP16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 KATNBL1Q9H079 304 aa16.86■□□□□ 0.29
NKX3-1-202ENST00000523261 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 GDPD5Q8WTR4 605 aa16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 RIPK3Q9Y572 518 aa16.85■□□□□ 0.29
NKX3-1-202ENST00000523261 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 ACTN1P12814 892 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 AKR1B1P15121 316 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 KCNA5P22460 613 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 PTCRAQ6ISU1 281 aaPredicted RBP16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 SPTBN4Q9H254 2564 aa16.84■□□□□ 0.29
NKX3-1-202ENST00000523261 GRXCR2A6NFK2 248 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 ZNF536O15090 1300 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 MYH8P13535 1937 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 PSMC6P62333 389 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 FOXK2Q01167 660 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 TNNI3KQ59H18 835 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 GNEQ9Y223 722 aaKnown RBP16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.28
NKX3-1-202ENST00000523261 PTPRSQ13332 1948 aa16.82■□□□□ 0.28
NKX3-1-202ENST00000523261 TRIOO75962 3097 aa16.82■□□□□ 0.28
NKX3-1-202ENST00000523261 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
NKX3-1-202ENST00000523261 PNMA6EA0A0J9YXQ4 647 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 GNAI3P08754 354 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 CYP2D6P10635 497 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 CYP2C9P11712 490 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 CCDC144CPQ8IYA2 1237 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 DYNLL2Q96FJ2 89 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 TRMT13Q9NUP7 481 aaKnown RBP16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 TET1Q8NFU7 2136 aa16.81■□□□□ 0.28
NKX3-1-202ENST00000523261 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 PTGS1P23219 599 aa16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 TMED8Q6PL24 325 aaPredicted RBP16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 PRSS33Q8NF86 280 aa16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 API5Q9BZZ5 524 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 ZFHX2Q9C0A1 2572 aaPredicted RBP16.8■□□□□ 0.28
NKX3-1-202ENST00000523261 TNKSO95271 1327 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 SUPT20HL2P0C7V6 817 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 RFC2P35250 354 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 PUS10Q3MIT2 529 aaKnown RBP16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 NEK9Q8TD19 979 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 CRNKL1Q9BZJ0 848 aaKnown RBP16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 AP5M1Q9H0R1 490 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 SUGCTQ9HAC7 445 aa16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
NKX3-1-202ENST00000523261 TANC1Q9C0D5 1861 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 MAGEB6P1A0A0J9YX57 407 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 ZEB2O60315 1214 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 ZP2Q05996 745 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 GOPCQ9HD26 462 aa16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
NKX3-1-202ENST00000523261 TECTAO75443 2155 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 C19orf67A6NJJ6 358 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 BAIAP3O94812 1187 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 SMPD1P17405 629 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 PTPN5P54829 565 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 CNTN2Q02246 1040 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 CPXCR1Q8N123 301 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 SDR42E1Q8WUS8 393 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 TLR7Q9NYK1 1049 aaKnown RBP16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
NKX3-1-202ENST00000523261 CACNA1HO95180 2353 aa16.76■□□□□ 0.27
NKX3-1-202ENST00000523261 RAD21O60216 631 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms