RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
CTNNA1-221ENST00000520339 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTNNA1-221ENST00000520339 ALG2Q9H553 416 aa11.16□□□□□ -0.62
CTNNA1-221ENST00000520339 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
CTNNA1-221ENST00000520339 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
CTNNA1-221ENST00000520339 TRIOBPQ9H2D6 2365 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 SLC15A5A6NIM6 579 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 USP17L12C9JPN9 530 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 USP17L21D6R901 530 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 GLRX3O76003 335 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 HOXC6P09630 235 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 AKR1B1P15121 316 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 COG2Q14746 738 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 FAM160A2Q8N612 972 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 CCDC17Q96LX7 622 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 APBA2Q99767 749 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 PUS7LQ9H0K6 701 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 ECHDC1Q9NTX5 307 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 PTPRFP10586 1907 aa11.15□□□□□ -0.62
CTNNA1-221ENST00000520339 LOC285556D6RIA3 1793 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 MAST2Q6P0Q8 1798 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 IGHA2P01877 340 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 CCND3P30281 292 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 CDK8P49336 464 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 GRB14Q14449 540 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 FKBPLQ9UIM3 349 aa11.14□□□□□ -0.63
CTNNA1-221ENST00000520339 RFX1P22670 979 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 MSS51Q4VC12 460 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 MFSD14CQ5VZR4 134 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 ZSCAN25Q6NSZ9 544 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 CTR9Q6PD62 1173 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 CLEC10AQ8IUN9 316 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 LPAR1Q92633 364 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 C11orf49Q9H6J7 331 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
CTNNA1-221ENST00000520339 COL6A1P12109 1028 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 SOX11P35716 441 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 ICA1Q05084 483 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 MB21D1Q8N884 522 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 OSBP2Q969R2 916 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 SPATC1LQ9H0A9 340 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 STAP2Q9UGK3 403 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 DOCK3Q8IZD9 2030 aa11.12□□□□□ -0.63
CTNNA1-221ENST00000520339 GSG1L2A8MUP6 293 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 STRNO43815 780 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 ERCC3P19447 782 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 PTPN5P54829 565 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 NR1H3Q13133 447 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 SBK1Q52WX2 424 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 SPICE1Q8N0Z3 855 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 APPBP2Q92624 585 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 ATG4CQ96DT6 458 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 PRDM9Q9NQV7 894 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 IVNS1ABPQ9Y6Y0 642 aa11.11□□□□□ -0.63
CTNNA1-221ENST00000520339 PFASO15067 1338 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 A0A1W2PPC1 479 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 COBLO75128 1261 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 FLOT1O75955 427 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 FBXO45P0C2W1 286 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 ADORA2AP29274 412 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 CYP2C19P33261 490 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 OLFML2BQ68BL8 750 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 C7orf61Q8IZ16 206 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 GDF15Q99988 308 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 PPP1R12CQ9BZL4 782 aa11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-221ENST00000520339 DDX20Q9UHI6 824 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms