RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SPDYE16A6NNV3 312 aaPredicted RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 DSG3P32926 999 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 TM4SF4P48230 202 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 GCLCP48506 637 aaPredicted RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 HERVK_113P62684 666 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 FUT2Q10981 343 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 NTRK3Q16288 839 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 CDC37Q16543 378 aaPredicted RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
SDC2-203ENST00000519587 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
SDC2-203ENST00000519587 PNMA6FA0A0J9YX94 578 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
SDC2-203ENST00000519587 ZBTB5O15062 677 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
SDC2-203ENST00000519587 DEXIO95424 95 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 OAZ1P54368 228 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 ST3GAL1Q11201 340 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 TAF1CQ15572 869 aaPredicted RBP16.35■□□□□ 0.21
SDC2-203ENST00000519587 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 PHKBQ93100 1093 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 PTPN18Q99952 460 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 RANBP17Q9H2T7 1088 aaKnown RBP16.35■□□□□ 0.21
SDC2-203ENST00000519587 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 VAT1LQ9HCJ6 419 aa16.35■□□□□ 0.21
SDC2-203ENST00000519587 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
SDC2-203ENST00000519587 VWA5AO00534 786 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 CYTH3O43739 400 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 XBP1P17861 261 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 MTMR8Q96EF0 704 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 PIGSQ96S52 555 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 SLC38A10Q9HBR0 1119 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 RABGAP1Q9Y3P9 1069 aa16.34■□□□□ 0.21
SDC2-203ENST00000519587 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
SDC2-203ENST00000519587 CTDNEP1O95476 244 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 ICAM1P05362 532 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 SCG2P13521 617 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 COPB2P35606 906 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 FAM177A1Q8N128 213 aaPredicted RBP16.33■□□□□ 0.2
SDC2-203ENST00000519587 SMARCC2Q8TAQ2 1214 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 CCDC12Q8WUD4 166 aaPredicted RBP16.33■□□□□ 0.2
SDC2-203ENST00000519587 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 P2RX7Q99572 595 aaKnown RBP16.33■□□□□ 0.2
SDC2-203ENST00000519587 AMNQ9BXJ7 453 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.2
SDC2-203ENST00000519587 ATP2A1O14983 1001 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 JAK2O60674 1132 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 CYP2C8P10632 490 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 CCNA1P78396 465 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 TRIM29Q14134 588 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
SDC2-203ENST00000519587 SLC35G1Q2M3R5 365 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 PRPF38BQ5VTL8 546 aaKnown RBP16.32■□□□□ 0.2
SDC2-203ENST00000519587 PPP1R18Q6NYC8 613 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
SDC2-203ENST00000519587 ABCB11O95342 1321 aa16.31■□□□□ 0.2
SDC2-203ENST00000519587 PDCP20941 246 aa16.31■□□□□ 0.2
SDC2-203ENST00000519587 PLS1Q14651 629 aa16.31■□□□□ 0.2
SDC2-203ENST00000519587 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
SDC2-203ENST00000519587 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
SDC2-203ENST00000519587 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 hCG_1642624A0A1W2PR95 340 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 GJB2P29033 226 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 SOX10P56693 466 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 SNAP25P60880 206 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 FAM110CQ1W6H9 321 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
SDC2-203ENST00000519587 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
SDC2-203ENST00000519587 SH3GLB2Q9NR46 395 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
SDC2-203ENST00000519587 TLR2O60603 784 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 SLC25A27O95847 323 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 STAT3P40763 770 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 NAPAP54920 295 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 ERVK-24P63145 666 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 CRHR2Q13324 411 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms