RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SCNN1DP51172 638 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 SAR1BQ9Y6B6 198 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 KCNQ3O43525 872 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 ALAS1P13196 640 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 CFAP221Q4G0U5 840 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 FAM160B1Q5W0V3 765 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 LRRC8AQ8IWT6 810 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLC10A4Q96EP9 437 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLFN13Q68D06 897 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 GREM2Q9H772 168 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 FAN1Q9Y2M0 1017 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 GAS7O60861 476 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 CNGA1P29973 690 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 NRBP2Q9NSY0 501 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 KLHL14Q9P2G3 628 aa13.49□□□□□ -0.25
PCDHGA6-201ENST00000517434 HGSO14964 777 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CCNT1O60563 726 aaKnown RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 KRT9P35527 623 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 TBC1D8BQ0IIM8 1120 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 LONRF2Q1L5Z9 754 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CFAP157Q5JU67 520 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CCDC51Q96ER9 411 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 HAUS7Q99871 368 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 GINS2Q9Y248 185 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 PALM3A6NDB9 673 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 ABCC4O15439 1325 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CHMP2AO43633 222 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 DDAH1O94760 285 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 BCAMP50895 628 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 E2F5Q15329 346 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 DIS3L2Q8IYB7 885 aaKnown RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 GDAP1L1Q96MZ0 367 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 NUP58Q9BVL2 599 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CHUKO15111 745 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 MTX1Q13505 466 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 CLUL1Q15846 466 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 USH1GQ495M9 461 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 SEL1L2Q5TEA6 688 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 HOMER3Q9NSC5 361 aa13.48□□□□□ -0.25
PCDHGA6-201ENST00000517434 OPHN1O60890 802 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ATP1A2P50993 1020 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CALCRLQ16602 461 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 PODNQ7Z5L7 613 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CRB1P82279 1406 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CCDC151A5D8V7 595 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZNF174Q15697 407 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 TXNRD1Q16881 649 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CUTAO60888 179 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 MAP3K21Q5TCX8 1036 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 PI4KBQ9UBF8 816 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZNF521Q96K83 1311 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 TRAF5O00463 557 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP17L8P0C7I0 530 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 PLCB3Q01970 1234 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 ACTR5Q9H9F9 607 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
PCDHGA6-201ENST00000517434 CLTCL1P53675 1640 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 TXKP42681 527 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 CCDC14Q49A88 953 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZNF654Q8IZM8 581 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms