RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 ZNF214Q9UL59 606 aaPredicted RBP16.91■□□□□ 0.3
SNF8-212ENST00000514089 GABRQQ9UN88 632 aa16.91■□□□□ 0.3
SNF8-212ENST00000514089 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
SNF8-212ENST00000514089 PALM3A6NDB9 673 aaPredicted RBP16.9■□□□□ 0.3
SNF8-212ENST00000514089 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 ATP2A1O14983 1001 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 RXRAP19793 462 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 RGS2P41220 211 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 TROAPQ12815 778 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 ANKRD35Q8N283 1001 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 BRF1Q92994 677 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
SNF8-212ENST00000514089 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 ADCY3O60266 1144 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 ICAM1P05362 532 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 CAP1Q01518 475 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 COL9A3Q14050 684 aaPredicted RBP16.89■□□□□ 0.29
SNF8-212ENST00000514089 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 CHST13Q8NET6 341 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 REPS2Q8NFH8 660 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 PIBF1Q8WXW3 757 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 C22orf23Q9BZE7 217 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
SNF8-212ENST00000514089 HPS5Q9UPZ3 1129 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 RIPK3Q9Y572 518 aa16.89■□□□□ 0.29
SNF8-212ENST00000514089 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 GOLGA8BA8MQT2 603 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
SNF8-212ENST00000514089 ADORA2AP29274 412 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 GRK4P32298 578 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 APOBRQ0VD83 1088 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 TRAF1Q13077 416 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 MAP2K5Q13163 448 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 CDC37Q16543 378 aaPredicted RBP16.88■□□□□ 0.29
SNF8-212ENST00000514089 RTN1Q16799 776 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 USH1GQ495M9 461 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 RNF146Q9NTX7 359 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
SNF8-212ENST00000514089 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
SNF8-212ENST00000514089 GJD2Q9UKL4 321 aa16.88■□□□□ 0.29
SNF8-212ENST00000514089 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 METAP2P50579 478 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNF8-212ENST00000514089 UBXN2AP68543 259 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 IRF5Q13568 498 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
SNF8-212ENST00000514089 ABRAQ8N0Z2 381 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 SH3TC2Q8TF17 1288 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 RRP36Q96EU6 259 aaKnown RBP16.87■□□□□ 0.29
SNF8-212ENST00000514089 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
SNF8-212ENST00000514089 ELNP15502 786 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 NEK4P51957 841 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 GRB14Q14449 540 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 ANKRD1Q15327 319 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 MORN1Q5T089 497 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 AMNQ9BXJ7 453 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 LOC285556D6RIA3 1793 aa16.86■□□□□ 0.29
SNF8-212ENST00000514089 ZBTB5O15062 677 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 PGK2P07205 417 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 XRCC5P13010 732 aaKnown RBP16.85■□□□□ 0.29
SNF8-212ENST00000514089 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 QRICH1Q2TAL8 776 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 MFSD14CQ5VZR4 134 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 CMTR1Q8N1G2 835 aaKnown RBP16.85■□□□□ 0.29
SNF8-212ENST00000514089 PXYLP1Q8TE99 480 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 PIGSQ96S52 555 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 APBA2Q99767 749 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
SNF8-212ENST00000514089 TMEM106CQ9BVX2 250 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
SNF8-212ENST00000514089 ZNF536O15090 1300 aa16.85■□□□□ 0.29
SNF8-212ENST00000514089 MYH8P13535 1937 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 AKAP17AQ02040 695 aaKnown RBP16.84■□□□□ 0.29
SNF8-212ENST00000514089 MCF2L2Q86YR7 1114 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
SNF8-212ENST00000514089 CPLX1O14810 134 aa16.83■□□□□ 0.28
SNF8-212ENST00000514089 ABCB11O95342 1321 aa16.83■□□□□ 0.28
SNF8-212ENST00000514089 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
SNF8-212ENST00000514089 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
SNF8-212ENST00000514089 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms