RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 GRK4P32298 578 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 NTF4P34130 210 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 NLRC3Q7RTR2 1065 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 KRT28Q7Z3Y7 464 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 FAM9BQ8IZU0 186 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 DNAJC7Q99615 494 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 TMPRSS13Q9BYE2 586 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 WNT10AQ9GZT5 417 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 B2RBV5 119 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 FBLN1P23142 703 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 ID3Q02535 119 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 ZYXQ15942 572 aaKnown RBP9.22□□□□□ -0.93
RFC1-213ENST00000512275 ZBTB37Q5TC79 503 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 ACSF2Q96CM8 615 aaPredicted RBP9.22□□□□□ -0.93
RFC1-213ENST00000512275 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.22□□□□□ -0.93
RFC1-213ENST00000512275 CSADQ9Y600 493 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 SLC12A7Q9Y666 1083 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 NPHP3Q7Z494 1330 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
RFC1-213ENST00000512275 COL3A1P02461 1466 aaPredicted RBP9.21□□□□□ -0.93
RFC1-213ENST00000512275 SLIT3O75094 1523 aa9.21□□□□□ -0.93
RFC1-213ENST00000512275 NFAT5O94916 1531 aa9.21□□□□□ -0.93
RFC1-213ENST00000512275 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
RFC1-213ENST00000512275 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.93
RFC1-213ENST00000512275 A0A0A0MRY4 1105 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 MEGF11A6BM72 1044 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 FANCGO15287 622 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 WISP1O95388 367 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 PGRP06401 933 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 EXOSC6Q5RKV6 272 aaKnown RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 MRM1Q6IN84 353 aaKnown RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 C6orf15Q6UXA7 325 aaPredicted RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 UNC5AQ6ZN44 842 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 FAM178BQ8IXR5 827 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 FMR1NBQ8N0W7 255 aaPredicted RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 SLC9A7Q96T83 725 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 KANSL2Q9H9L4 492 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 CRIM1Q9NZV1 1036 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 LTBP3Q9NS15 1303 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 RGPD5Q99666 1765 aa9.21□□□□□ -0.94
RFC1-213ENST00000512275 SMG6Q86US8 1419 aaKnown RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
RFC1-213ENST00000512275 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
RFC1-213ENST00000512275 MTHFSP49914 203 aa9.2□□□□□ -0.94
RFC1-213ENST00000512275 IFRD2Q12894 506 aaPredicted RBP9.2□□□□□ -0.94
RFC1-213ENST00000512275 RRS1Q15050 365 aaKnown RBP9.2□□□□□ -0.94
RFC1-213ENST00000512275 PPM1JQ5JR12 505 aa9.2□□□□□ -0.94
RFC1-213ENST00000512275 SH3TC2Q8TF17 1288 aa9.2□□□□□ -0.94
RFC1-213ENST00000512275 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
RFC1-213ENST00000512275 IQSEC2Q5JU85 1478 aa9.2□□□□□ -0.94
RFC1-213ENST00000512275 CHURC1-FNTBB4DL54 471 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 DUOXA2Q1HG44 320 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 ARSHQ5FYA8 562 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 ST13P5Q8NFI4 369 aaPredicted RBP9.19□□□□□ -0.94
RFC1-213ENST00000512275 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
RFC1-213ENST00000512275 ZNF669Q96BR6 464 aaPredicted RBP9.19□□□□□ -0.94
RFC1-213ENST00000512275 CFAP53Q96M91 514 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 SUGCTQ9HAC7 445 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 DISC1Q9NRI5 854 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 COL16A1Q07092 1604 aaPredicted RBP9.19□□□□□ -0.94
RFC1-213ENST00000512275 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
RFC1-213ENST00000512275 DDAH1O94760 285 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
RFC1-213ENST00000512275 MCATQ8IVS2 390 aaKnown RBP9.18□□□□□ -0.94
RFC1-213ENST00000512275 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
RFC1-213ENST00000512275 SLFN12Q8IYM2 578 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
RFC1-213ENST00000512275 RAD18Q9NS91 495 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 POLKQ9UBT6 870 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
RFC1-213ENST00000512275 SPATA31A3Q5VYP0 1347 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 DOC2BQ14184 412 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 WDR43Q15061 677 aaKnown RBP eCLIP9.17□□□□□ -0.94
RFC1-213ENST00000512275 MTERF2Q49AM1 385 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
RFC1-213ENST00000512275 RNF214Q8ND24 703 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 TMEM87BQ96K49 555 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 GSX1Q9H4S2 264 aaPredicted RBP9.17□□□□□ -0.94
RFC1-213ENST00000512275 TMEM260Q9NX78 707 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
RFC1-213ENST00000512275 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
RFC1-213ENST00000512275 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
RFC1-213ENST00000512275 ARHGEF10O15013 1369 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 USP19O94966 1318 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms