RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 TCTN2Q96GX1 697 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 GPATCH3Q96I76 525 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 CCDC140Q96MF4 163 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 HSPA12BQ96MM6 686 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 MCMBPQ9BTE3 642 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 TRIT1Q9H3H1 467 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 SPC25Q9HBM1 224 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 CYP26B1Q9NR63 512 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 GPATCH2Q9NW75 528 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 PRKAB1Q9Y478 270 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 ST14Q9Y5Y6 855 aa4.47□□□□□ -1.69
CALCOCO2-216ENST00000509784 SSU72P8A0A1W2PR75 194 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 IRS4O14654 1257 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 PLD2O14939 933 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 GSC2O15499 205 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 CYP26A1O43174 497 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 CEACAM5P06731 702 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 SYPP08247 313 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 H2AFB1P0C5Y9 115 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 H2AFB2P0C5Z0 115 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 SRFP11831 508 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 IFNGR1P15260 489 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 TPP2P29144 1249 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 MASP1P48740 699 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 SCRN1Q12765 414 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 TSPYL5Q86VY4 417 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 SPACA3Q8IXA5 215 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 NIM1KQ8IY84 436 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 ANKRD13AQ8IZ07 590 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZNF655Q8N720 491 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 NINJ1Q92982 152 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 CLUHP3Q96NS8 147 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 MKNK2Q9HBH9 465 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 NDOR1Q9UHB4 597 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 PLAGL2Q9UPG8 496 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 PLAAQ9Y263 795 aa4.46□□□□□ -1.7
CALCOCO2-216ENST00000509784 DNAJC25-GNG10A0A024R161 153 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 C2orf71A6NGG8 1288 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 AURKAO14965 403 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 FKTNO75072 461 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 CPP00450 1065 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 GSTM1P09488 218 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 MYCLP1P12525 358 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 VAV1P15498 845 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 IBSPP21815 317 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 BMP8BP34820 402 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 PCBP3P57721 371 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 MAP4K2Q12851 820 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 IFI16Q16666 785 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 FNDC3BQ53EP0 1204 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 USP53Q70EK8 1073 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 USHBP1Q8N6Y0 703 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 MFSD3Q96ES6 412 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 FCRL3Q96P31 734 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 SLC12A9Q9BXP2 914 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 MRPL4Q9BYD3 311 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 FOXP3Q9BZS1 431 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 SFMBT1Q9UHJ3 866 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 COL4A3BPQ9Y5P4 624 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 BACE2Q9Y5Z0 518 aa4.45□□□□□ -1.7
CALCOCO2-216ENST00000509784 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 TMEM265A0A087WTH1 108 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 RFPL3O75679 317 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SCG5P05408 212 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 THBDP07204 575 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 C6orf222P0C671 652 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SDSP20132 328 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SEPHS1P49903 392 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 CLCN7P51798 805 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 CYP4F3Q08477 520 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 NTRK3Q16288 839 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 RSPO4Q2I0M5 234 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 TM4SF20Q53R12 229 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 NKAPLQ5M9Q1 402 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SLC35F1Q5T1Q4 408 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 DENND5AQ6IQ26 1287 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZDHHC13Q8IUH4 622 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 PPIL6Q8IXY8 311 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SLC7A14Q8TBB6 771 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZCRB1Q8TBF4 217 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 NETO1Q8TDF5 533 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SPOCK3Q9BQ16 436 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 CDADC1Q9BWV3 514 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SLC52A2Q9HAB3 445 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 SEMA3GQ9NS98 782 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 PIM2Q9P1W9 311 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZC3H7BQ9UGR2 993 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 DUSP13Q9UII6 198 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 TCFL5Q9UL49 500 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 RNF112Q9ULX5 631 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 TRAF6Q9Y4K3 522 aa4.44□□□□□ -1.7
CALCOCO2-216ENST00000509784 PRR19A6NJB7 356 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 MSTNO14793 375 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 DYRK3O43781 588 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZNF205O95201 554 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 PROCP04070 461 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 PLS3P13797 630 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms