RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 MKL1Q969V6 931 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 KATNBL1Q9H079 304 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 PRDM6Q9NQX0 595 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 FBXO40Q9UH90 709 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 FEM1BQ9UK73 627 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 PRUNE2Q8WUY3 3088 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 MCM3APO60318 1980 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 CTAGE5O15320 804 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 GPAA1O43292 621 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 PBX2P40425 430 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 OAZ1P54368 228 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 GNASQ5JWF2 1037 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 RASIP1Q5U651 963 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 TMEM199Q8N511 208 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 PBX4Q9BYU1 374 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
TSPAN17-206ENST00000507471 LRRC37A2A6NM11 1700 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 TTLL1O95922 423 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 ACRP10323 421 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 TDO2P48775 406 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 NKX3-2P78367 333 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 TJAP1Q5JTD0 557 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 HOMER2Q9NSB8 354 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
TSPAN17-206ENST00000507471 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 M0R2C6 588 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 CD4P01730 458 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 BMP3P12645 472 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 GNAT2P19087 354 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 BEX3Q00994 111 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 TSHZ3Q63HK5 1081 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 CCDC129Q6ZRS4 1044 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 ZNF365Q70YC5 407 aa16.5■□□□□ 0.23
TSPAN17-206ENST00000507471 ASTN1O14525 1302 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 APPP05067 770 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 PSRC1Q6PGN9 363 aaPredicted RBP16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 GAS2L1Q99501 681 aaPredicted RBP16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 PRDM12Q9H4Q4 367 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
TSPAN17-206ENST00000507471 ZNF536O15090 1300 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 TSPY3P0CV98 308 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 TSPY8P0CW00 308 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 FDX1P10109 184 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 CYP2C18P33260 490 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 STAT2P52630 851 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 SLC43A3Q8NBI5 491 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
TSPAN17-206ENST00000507471 SOWAHBA6NEL2 793 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 CXCL17Q6UXB2 119 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 IL23AQ9NPF7 189 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 CXXC1Q9P0U4 656 aaPredicted RBP16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
TSPAN17-206ENST00000507471 UMODL1Q5DID0 1318 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 GBF1Q92538 1859 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 ASB14A6NK59 587 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 PTGS1P23219 599 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 TFAP4Q01664 338 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 PDE4BQ07343 736 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 FAM160B2Q86V87 743 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 CHMP4CQ96CF2 233 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
TSPAN17-206ENST00000507471 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms