RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 COL6A3P12111 3177 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 ASB14A6NK59 587 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 M0R2C6 588 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 SLC1A4P43007 532 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-219ENST00000505207 CUL9Q8IWT3 2517 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 ZEB2O60315 1214 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 PLA2G6O60733 806 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 TIMP1P01033 207 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 GJA9P57773 515 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 PPARAQ07869 468 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-219ENST00000505207 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 CABYRO75952 493 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■□□□□ 10.1
UBE2D3-219ENST00000505207 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 AP5M1Q9H0R1 490 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
UBE2D3-219ENST00000505207 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 ARVCFO00192 962 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 ASGR1P07306 291 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 MX1P20591 662 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 MCCP23508 829 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
UBE2D3-219ENST00000505207 ALAS1P13196 640 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 FOSL2P15408 326 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 ITGB8P26012 769 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 CDK7P50613 346 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 IQSEC1Q6DN90 963 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 MTIF3Q9H2K0 278 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-219ENST00000505207 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 EPHB4P54760 987 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 NKX3-2P78367 333 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 Q9Y3F1 56 aa13.14□□□□□ -0.31
UBE2D3-219ENST00000505207 MYADML2A6NDP7 307 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 ALX1Q15699 326 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 FGD4Q96M96 766 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms