RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SUSD2Q9UGT4 822 aa4.11□□□□□ -1.75
HMGB1P35-201ENST00000503360 NUDT19A8MXV4 375 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 PRPF40AO75400 957 aaKnown RBP4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 ZNF205O95201 554 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 HTR3BO95264 441 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 CYBBP04839 570 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 GBP1P32455 592 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 CCNFP41002 786 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 CEBPAP49715 358 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 FOXO4P98177 505 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 NBPF12Q5TAG4 269 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 PAQR3Q6TCH7 311 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 SLITRK6Q9H5Y7 841 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 ERVK13-1Q9NX77 482 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 GPR55Q9Y2T6 319 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 PMF1-BGLAPU3KQ54 211 aa4.1□□□□□ -1.75
HMGB1P35-201ENST00000503360 UNCXA6NJT0 531 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 PLA2G1BP04054 148 aaKnown RBP4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 ZNF20P17024 532 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 ACVRL1P37023 503 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 GDF5P43026 501 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 GJA9P57773 515 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 RBM10P98175 930 aaKnown RBP4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 DLX2Q07687 328 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 FERMT3Q86UX7 667 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 PHACTR4Q8IZ21 702 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 NUP43Q8NFH3 380 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 JARID2Q92833 1246 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 KIF2CQ99661 725 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 SPATA25Q9BR10 227 aa4.09□□□□□ -1.75
HMGB1P35-201ENST00000503360 E9PSI1 815 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 UBOX5O94941 541 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 PRAMEF1O95521 474 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 FSHBP01225 129 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 NCAM1P13591 858 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 TACR2P21452 398 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 LIMS1P48059 325 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 NCKAP1LP55160 1127 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 CORO7P57737 925 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 ZNF200P98182 395 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 XPCQ01831 940 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 CAMK2GQ13555 558 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 MAP3K11Q16584 847 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 TMC3Q7Z5M5 1100 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 CARFQ8N187 725 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 DVL3Q92997 716 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 MRRFQ96E11 262 aaKnown RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 DUSP9Q99956 384 aaKnown RBP4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 MENTQ9BUN1 341 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 RNF19AQ9NV58 838 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 KLHL3Q9UH77 587 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 DUSP10Q9Y6W6 482 aa4.08□□□□□ -1.76
HMGB1P35-201ENST00000503360 ROBO2Q9HCK4 1378 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 FKTNO75072 461 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 ATE1O95260 518 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 PLATP00750 562 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 CNR2P34972 360 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 MPP2Q14168 576 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 CDCP2Q5VXM1 449 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 HLA-DQA1Q5Y7H0 255 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 ZPBP2Q6X784 338 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 BNC2Q6ZN30 1099 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 B3GNT8Q7Z7M8 397 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 NLGN2Q8NFZ4 835 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 FAM161BQ96MY7 647 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 SRRTQ9BXP5 876 aaKnown RBP4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 PARP2Q9UGN5 583 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 TLR6Q9Y2C9 796 aa4.07□□□□□ -1.76
HMGB1P35-201ENST00000503360 USP31Q70CQ4 1352 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 DNAJA2O60884 412 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 F13A1P00488 732 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 DBHP09172 617 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 C6P13671 934 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 ATF2P15336 505 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 VAV1P15498 845 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 PURAQ00577 322 aaKnown RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 MVKQ03426 396 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 KIR3DS1Q14943 382 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 TAF1CQ15572 869 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 CRIP3Q6Q6R5 217 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 REC114Q7Z4M0 266 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 LSRQ86X29 649 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 ZNF526Q8TF50 670 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 CPA5Q8WXQ8 436 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 MRIQ9BWK5 157 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 BCL11AQ9H165 835 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 CHST7Q9NS84 486 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 GMIPQ9P107 970 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 KIAA1522Q9P206 1035 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 IMPACTQ9P2X3 320 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 POLR3KQ9Y2Y1 108 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 TSC22D4Q9Y3Q8 395 aa4.06□□□□□ -1.76
HMGB1P35-201ENST00000503360 GSNP06396 782 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 RANGAP1P46060 587 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 PSMD2Q13200 908 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 PWP1Q13610 501 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 CYP2R1Q6VVX0 501 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 USP51Q70EK9 711 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 ZNF761Q86XN6 746 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 TMEM52Q8NDY8 209 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms